Evidence map›Paper›PMID 19561128›Full record

ArticleJournal of bacteriology2009

Production of 3-nitrosoindole derivatives by Escherichia coli during anaerobic growth.

Young-Man Kwon, Bernard Weiss

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Biochemical properties of Paracoccus denitrificans FnrP: reactions with molecular oxygen and nitric oxide.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Article
  5. Recent Advances in Multinuclear Metal Nitrosyl Complexes.Coordination chemistry reviews · 2016
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Young-Man KwonDepartment of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia 30322, USA.
Bernard Weiss
Emory University · US

Funding

Resistance to UV Damage: Role of Gene RegulationP01ES011163 · NIEHS · EMORY UNIVERSITY · PI DOETSCH, PAUL WILLIAM · 2002 to 2012
$12.6M
NIEHS NIH HHS ES11163NIEHS NIH HHS P01 ES011163
6 · The paper itself

Abstract

When Escherichia coli K-12 is grown anaerobically in medium containing tryptophan and sodium nitrate, it produces red compounds. The reaction requires functional genes for trytophanase (tnaA), a tryptophan permease (tnaB), and a nitrate reductase (narG), as well as a natural drop in the pH of the culture. Mass spectrometry revealed that the purified chromophores had mass/charge ratios that closely match those for indole red, indoxyl red, and an indole trimer. These compounds are known products of chemical reactions between indole and nitrous acid. They are derived from an initial reaction of 3-nitrosoindole with indole. Apparently, nitrite that is produced from the metabolic reduction of nitrate is converted in the acid medium to nitrous acid, which leads to the nitrosation of the indole that is generated by tryptophanase. An nfi (endonuclease V) mutant and a recA mutant were selectively killed during the period of chromophore production, and a uvrA strain displayed reduced growth. These effects depended on the addition of nitrate to the medium and on tryptophanase activity in the cells. Unexpectedly, the killing of a tnaA(+) nfi mutant was not accompanied by marked increases in mutation frequencies for several traits tested. The vulnerability of three DNA repair mutants indicates that a nitrosoindole or a derivative of a nitrosoindole produces lethal DNA damage.

Indexed as

Amino Acid Transport SystemsAnaerobiosisColony Count, MicrobialEscherichia coli K12Escherichia coli ProteinsIndolesMetabolic Networks and PathwaysMicrobial ViabilityNitrate ReductaseNitratesNitritesNitrous AcidTryptophanTryptophanaseAmino Acid Transport SystemsEscherichia coli ProteinsIndolesindoxyl redNarG protein, E coliNitrate ReductaseNitratesNitritesNitrous Acidsodium nitrateTnaB protein, E coliTryptophanTryptophanase

Identifiers

PMID19561128
PMCPMC2725616
OpenAlexW2096097580

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.