Evidence map›Paper›PMID 19558656›Full record

ArticleVirology journal2009

Respiratory viral infections detected by multiplex PCR among pediatric patients with lower respiratory tract infections seen at an urban hospital in Delhi from 2005 to 2007.

Preeti Bharaj, Wayne M Sullender, Sushil K Kabra, Kalaivani Mani, John Cherian, Vikas Tyagi, Harendra S Chahar, Samander Kaushik, Lalit Dar, Shobha Broor

Open access · goldAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Virology journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 145 citations in OpenAlex.

  1. Pooled it
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  14. Acute Viral Bronchiolitis: A Narrative Review.Journal of pediatric intensive care · 2023
    Review
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  20. Clinico-virological Profile, Intensive Care Needs, and Outcome of Infants with Acute Viral Bronchiolitis: A Prospective Observational Study.Indian journal of critical care medicine : peer-reviewed, official publication of Indian Society of Critical Care Medicine · 2021
    Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Preeti BharajDepartment of Microbiology, All India Institute of Medical Sciences, Ansari Nagar, New Delhi, 110029, India. tibharaj@yahoo.com
Wayne M Sullender
Sushil K Kabra
Kalaivani Mani
John Cherian
Vikas Tyagi
Harendra S Chahar
Samander Kaushik
Lalit Dar
Shobha Broor
All India Institute of Medical Sciences · INUniversity of Alabama at Birmingham · US

Funding

METAPNEUMOVIRUS INFECTIONS OF CHILDREN IN INDIAR21AI059792 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SULLENDER, WAYNE M · 2004 to 2006
$440k
NIAID NIH HHS 1 R21 AI59792-01NIAID NIH HHS R21 AI059792
6 · The paper itself

Abstract

backgroundAcute lower respiratory tract infections (ALRI) are the major cause of morbidity and mortality in young children worldwide. Information on viral etiology in ALRI from India is limited. The aim of the present study was to develop a simple, sensitive, specific and cost effective multiplex PCR (mPCR) assay without post PCR hybridization or nested PCR steps for the detection of respiratory syncytial virus (RSV), influenza viruses, parainfluenza viruses (PIV1-3) and human metapneumovirus (hMPV). Nasopharyngeal aspirates (NPAs) were collected from children with ALRI < or = 5 years of age. The sensitivity and specificity of mPCR was compared to virus isolation by centrifugation enhanced culture (CEC) followed by indirect immunofluorescence (IIF).

resultsFrom April 2005-March 2007, 301 NPAs were collected from children attending the outpatient department or admitted to the ward of All India Institute of Medical Sciences hospital at New Delhi, India. Multiplex PCR detected respiratory viruses in 106 (35.2%) of 301 samples with 130 viruses of which RSV was detected in 61, PIV3 in 22, PIV2 in 17, hMPV in 11, PIV1 in 10 and influenza A in 9 children. CEC-IIF detected 79 viruses only. The sensitivity of mPCR was 0.1TCID50 for RSV and influenza A and 1TCID50 for hMPV, PIV1, PIV2, PIV3 and Influenza B. Mixed infections were detected in 18.8% of the children with viral infections, none detected by CEC-IIF. Bronchiolitis was significantly associated with both total viral infections and RSV infection (p < 0.05). History of ARI in family predisposed children to acquire viral infection (p > 0.05).

conclusionMultiplex PCR offers a rapid, sensitive and reasonably priced diagnostic method for common respiratory viruses.

Indexed as

Child, PreschoolHospitalsHumansIndiaInfantNasopharynxPolymerase Chain ReactionRespiratory Tract InfectionsSensitivity and SpecificityUrban PopulationVirus DiseasesViruses

Identifiers

PMID19558656
PMCPMC2709894
OpenAlexW2051939229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.