Evidence map›Paper›PMID 19556541›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Structural and molecular basis of the assembly of the TRPP2/PKD1 complex.

Yong Yu, Maximilian H Ulbrich, Ming-Hui Li, Zafir Buraei, Xing-Zhen Chen, Albert C M Ong, Liang Tong, Ehud Y Isacoff, Jian Yang

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed.

  1. Article
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  9. Article
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  11. Article
  12. Vascular polycystin proteins in health and disease.Microcirculation (New York, N.Y. : 1994) · 2024
    Review
  13. Article
  14. Molecular and structural basis of the dual regulation of the polycystin-2 ion channel by small-molecule ligands.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Autosomal Dominant Polycystic Kidney Disease: Extrarenal Involvement.International journal of molecular sciences · 2024
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yong YuDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Maximilian H Ulbrich
Ming-Hui Li
Zafir Buraei
Xing-Zhen Chen
Albert C M Ong
Liang Tong
Ehud Y Isacoff
Jian Yang

Funding

TRPML1 channel physiology and pathophysiologyR01GM085234 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI YANG, JIAN · 2009 to 2022
$4.2M
STRUCTURAL REARRANGEMENTS IN CHANNEL GATINGR01NS035549 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD · 1996 to 2013
$4.1M
Structural basis of TRPC channel function and regulationR01NS045383 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI YANG, JIAN · 2002 to 2011
$3.2M
NIGMS NIH HHS GM085234NIGMS NIH HHS R01 GM085234NINDS NIH HHS NS035549NINDS NIH HHS NS045383NINDS NIH HHS R01 NS035549NINDS NIH HHS R01 NS045383Wellcome Trust 071201Wellcome Trust GR071201
6 · The paper itself

Abstract

Mutations in PKD1 and TRPP2 account for nearly all cases of autosomal dominant polycystic kidney disease (ADPKD). These 2 proteins form a receptor/ion channel complex on the cell surface. Using a combination of biochemistry, crystallography, and a single-molecule method to determine the subunit composition of proteins in the plasma membrane of live cells, we find that this complex contains 3 TRPP2 and 1 PKD1. A newly identified coiled-coil domain in the C terminus of TRPP2 is critical for the formation of this complex. This coiled-coil domain forms a homotrimer, in both solution and crystal structure, and binds to a single coiled-coil domain in the C terminus of PKD1. Mutations that disrupt the TRPP2 coiled-coil domain trimer abolish the assembly of both the full-length TRPP2 trimer and the TRPP2/PKD1 complex and diminish the surface expression of both proteins. These results have significant implications for the assembly, regulation, and function of the TRPP2/PKD1 complex and the pathogenic mechanism of some ADPKD-producing mutations.

Indexed as

Models, MolecularAmino Acid SequenceAnimalsBase SequenceCrystallizationHumansMolecular Sequence DataMultiprotein ComplexesProtein BindingProtein Structure, TertiarySequence Analysis, DNATRPP Cation ChannelsXenopusMultiprotein ComplexesTRPP Cation Channels

Identifiers

PMID19556541
PMCPMC2710685

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.