Evidence map›Paper›PMID 19555478›Full record

ArticleBMC neuroscience2009

Tissue-specific and neural activity-regulated expression of human BDNF gene in BAC transgenic mice.

Indrek Koppel, Tamara Aid-Pavlidis, Kaur Jaanson, Mari Sepp, Priit Pruunsild, Kaia Palm, Tõnis Timmusk

Open access · goldAbstract read
In one paragraph

Article in BMC neuroscience, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  7. Review
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  9. Article
  10. BDNF mediates adaptive brain and body responses to energetic challenges.Trends in endocrinology and metabolism: TEM · 2014
    Review
  11. Article
  12. Review
  13. Growth arrest and DNA-damage-inducible, beta (GADD45b)-mediated DNA demethylation in major psychosis.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2012
    Article
  14. Identification of cis-elements and transcription factors regulating neuronal activity-dependent transcription of human BDNF gene.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Indrek KoppelDepartment of Gene Technology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia. indrek.koppel@ttu.ee
Tamara Aid-Pavlidis
Kaur Jaanson
Mari Sepp
Priit Pruunsild
Kaia Palm
Tõnis Timmusk
Tallinn University of Technology · EE

Funding

Wellcome TrustWellcome Trust 067952
6 · The paper itself

Abstract

backgroundBrain-derived neurotrophic factor (BDNF) is a small secreted protein that has important roles in the developing and adult nervous system. Altered expression or changes in the regulation of the BDNF gene have been implicated in a variety of human nervous system disorders. Although regulation of the rodent BDNF gene has been extensively investigated, in vivo studies regarding the human BDNF gene are largely limited to postmortem analysis. Bacterial artificial chromosome (BAC) transgenic mice harboring the human BDNF gene and its regulatory flanking sequences constitute a useful tool for studying human BDNF gene regulation and for identification of therapeutic compounds modulating BDNF expression.

resultsIn this study we have generated and analyzed BAC transgenic mice carrying 168 kb of the human BDNF locus modified such that BDNF coding sequence was replaced with the sequence of a fusion protein consisting of N-terminal BDNF and the enhanced green fluorescent protein (EGFP). The human BDNF-BAC construct containing all BDNF 5' exons preceded by different promoters recapitulated the expression of endogenous BDNF mRNA in the brain and several non-neural tissues of transgenic mice. All different 5' exon-specific BDNF-EGFP alternative transcripts were expressed from the transgenic human BDNF-BAC construct, resembling the expression of endogenous BDNF. Furthermore, BDNF-EGFP mRNA was induced upon treatment with kainic acid in a promotor-specific manner, similarly to that of the endogenous mouse BDNF mRNA.

conclusionGenomic region covering 67 kb of human BDNF gene, 84 kb of upstream and 17 kb of downstream sequences is sufficient to drive tissue-specific and kainic acid-induced expression of the reporter gene in transgenic mice. The pattern of expression of the transgene is highly similar to BDNF gene expression in mouse and human. This is the first study to show that human BDNF gene is regulated by neural activity.

Indexed as

AnimalsBrainBrain-Derived Neurotrophic FactorChromosomes, Artificial, BacterialExcitatory Amino Acid AgonistsGene Expression RegulationGreen Fluorescent ProteinsHumansKainic AcidMiceMice, TransgenicNeuronsPromoter Regions, GeneticRNA, MessengerBrain-Derived Neurotrophic Factorenhanced green fluorescent proteinExcitatory Amino Acid AgonistsGreen Fluorescent ProteinsKainic AcidRNA, Messenger

Identifiers

PMID19555478
PMCPMC2708170
OpenAlexW2097660315

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.