Evidence map›Paper›PMID 19553569›Full record

ArticleJournal of clinical microbiology2009

Unexpectedly high proportion of ancestral Manu genotype Mycobacterium tuberculosis strains cultured from tuberculosis patients in Egypt.

Zeinab H Helal, Mohamed Seif El-Din Ashour, Somaia A Eissa, Ghanem Abd-Elatef, Thierry Zozio, Sankhiros Babapoor, Nalin Rastogi, Mazhar I Khan

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Article in Journal of clinical microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

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0cells of the map it votes in
17citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Trial
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  4. Simultaneous Detection of Mycobacterium tuberculosis and Atypical Mycobacteria by DNA-Microarray in Egypt.Medical principles and practice : international journal of the Kuwait University, Health Science Centre · 2022
    Article
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  6. Molecular identification ofEuropean academic research · 2016
    Article
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

Zeinab H HelalDepartment of Microbiology and Immunology, Faculty of Pharmacy, Al-Azhar University, Cairo, Egypt.
Mohamed Seif El-Din Ashour
Somaia A Eissa
Ghanem Abd-Elatef
Thierry Zozio
Sankhiros Babapoor
Nalin Rastogi
Mazhar I Khan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberculosis is one of the important public health problems in Egypt. However, limited information on the Mycobacterium tuberculosis genotypes circulating in Egypt is available. A total of 151 M. tuberculosis strains were characterized by spoligotyping. The results revealed that 74.8% of M. tuberculosis isolates grouped into 13 different clusters, while 25.2% had unique spoligotype patterns. Comparison with an international spoligotyping database (the SITVIT2 database) showed that types SIT53 (T1 variant) and SIT54 (Manu2 variant) were the most common types between cluster groups. In addition, new shared types SIT2977, SIT2978, and SIT2979 were observed. The results identified for the first time an unusually high proportion of ancestral Manu strains of M. tuberculosis from patients in Egypt. The percentage of the Manu clade in this study (27.15%) was significantly higher than its overall representation of 0.4% in the SITVIT2 database. We show that in Egypt tuberculosis is caused by a predominant M. tuberculosis genotype belonging to the ancestral Manu lineage which could be a missing link in the split between ancestral and modern tubercle bacilli during the evolution of M. tuberculosis.

Indexed as

Bacterial Typing TechniquesAdolescentAdultAgedAged, 80 and overCluster AnalysisDNA, BacterialDNA FingerprintingEgyptFemaleGenotypeHumansMaleMiddle AgedMolecular EpidemiologyMycobacterium tuberculosisDNA, Bacterial

Identifiers

PMID19553569
PMCPMC2738058

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.