Evidence map›Paper›PMID 19549928›Full record

ArticleThe Plant cell2009

Lutein accumulation in the absence of zeaxanthin restores nonphotochemical quenching in the Arabidopsis thaliana npq1 mutant.

Zhirong Li, Tae Kyu Ahn, Thomas J Avenson, Matteo Ballottari, Jeffrey A Cruz, David M Kramer, Roberto Bassi, Graham R Fleming, Jay D Keasling, Krishna K Niyogi

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 202 citations in OpenAlex.

  1. Article
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  4. Review
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  12. Chlorophyll to zeaxanthin energy transfer in nonphotochemical quenching: An exciton annihilation-free transient absorption study.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Acta pharmaceutica Sinica. B · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Cas9 deletion of lutein biosynthesis in the marine algaFrontiers in bioengineering and biotechnology · 2023
    Article
  19. Article
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Zhirong LiDepartment of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102, USA.
Tae Kyu Ahn
Thomas J Avenson
Matteo Ballottari
Jeffrey A Cruz
David M Kramer
Roberto Bassi
Graham R Fleming
Jay D Keasling
Krishna K Niyogi
Lawrence Berkeley National Laboratory · USUniversity of California, Berkeley · USUniversity of Verona · ITWashington State University · US

Funding

ANTIOXIDANT METABOLISM IN CHLAMYDOMONASR01GM058799 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI NIYOGI, KRISHNA K · 1999 to 2008
$1.7M
NIGMS NIH HHS GM058799NIGMS NIH HHS R01 GM058799
6 · The paper itself

Abstract

Plants protect themselves from excess absorbed light energy through thermal dissipation, which is measured as nonphotochemical quenching of chlorophyll fluorescence (NPQ). The major component of NPQ, qE, is induced by high transthylakoid DeltapH in excess light and depends on the xanthophyll cycle, in which violaxanthin and antheraxanthin are deepoxidized to form zeaxanthin. To investigate the xanthophyll dependence of qE, we identified suppressor of zeaxanthin-less1 (szl1) as a suppressor of the Arabidopsis thaliana npq1 mutant, which lacks zeaxanthin. szl1 npq1 plants have a partially restored qE but lack zeaxanthin and have low levels of violaxanthin, antheraxanthin, and neoxanthin. However, they accumulate more lutein and alpha-carotene than the wild type. szl1 contains a point mutation in the lycopene beta-cyclase (LCYB) gene. Based on the pigment analysis, LCYB appears to be the major lycopene beta-cyclase and is not involved in neoxanthin synthesis. The Lhcb4 (CP29) and Lhcb5 (CP26) protein levels are reduced by 50% in szl1 npq1 relative to the wild type, whereas other Lhcb proteins are present at wild-type levels. Analysis of carotenoid radical cation formation and leaf absorbance changes strongly suggest that the higher amount of lutein substitutes for zeaxanthin in qE, implying a direct role in qE, as well as a mechanism that is weakly sensitive to carotenoid structural properties.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsBase SequenceIntramolecular LyasesLightLuteinMolecular Sequence DataMutationOxidoreductasesSequence AlignmentXanthophyllsZeaxanthinsArabidopsis ProteinsIntramolecular LyasesLuteinlycopene cyclase-isomeraseOxidoreductasesviolaxanthin de-epoxidaseXanthophyllsZeaxanthins

Identifiers

PMID19549928
PMCPMC2714924
OpenAlexW2168984531

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.