Evidence map›Paper›PMID 19549316›Full record

ArticleMalaria journal2009

Analysis of von Willebrand factor A domain-related protein (WARP) polymorphism in temperate and tropical Plasmodium vivax field isolates.

Saber Gholizadeh, Navid Dinparast Djadid, Hamid Reza Basseri, Sedigheh Zakeri, Hossein Ladoni

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Article in Malaria journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
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4citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Saber GholizadehBiotechnology Research Center (BRC), Pasteur Institute of Iran (PII), Tehran, Iran. sabergholizadeh@yahoo.com
Navid Dinparast Djadid
Hamid Reza Basseri
Sedigheh Zakeri
Hossein Ladoni

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe identification of key molecules is crucial for designing transmission-blocking vaccines (TBVs), among those ookinete micronemal proteins are candidate as a general class of malaria transmission-blocking targets. Here, the sequence analysis of an extra-cellular malaria protein expressed in ookinetes, named von Willebrand factor A domain-related protein (WARP), is reported in 91 Plasmodium vivax isolates circulating in different regions of Iran.

methodsClinical isolates were collected from north temperate and southern tropical regions in Iran. Primers have been designed based on P. vivax sequence (ctg_6991) which amplified a fragment of about 1044 bp with no size variation. Direct sequencing of PCR products was used to determine polymorphism and further bioinformatics analysis in P. vivax sexual stage antigen, pvwarp.

resultsAmplified pvwarp gene showed 886 bp in size, with no intron. BLAST analysis showed a similarity of 98-100% to P. vivax Sal-I strain; however, Iranian isolates had 2 bp mismatches in 247 and 531 positions that were non-synonymous substitution [T (ACT) to A (GCT) and R (AGA) to S (AGT)] in comparison with the Sal-I sequence.

conclusionThis study presents the first large-scale survey on pvwarp polymorphism in the world, which provides baseline data for developing WARP-based TBV against both temperate and tropical P. vivax isolates.

Indexed as

Polymorphism, GeneticAmino Acid SequenceAnimalsBase SequenceClimateDNA PrimersHumansIranMalaria, VivaxMolecular Sequence DataPhylogenyPlasmodium vivaxPolymerase Chain ReactionProtozoan ProteinsDNA PrimersProtozoan ProteinsWARP protein, Plasmodium

Identifiers

PMID19549316
PMCPMC2709902

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.