Evidence map›Paper›PMID 19543378›Full record

ArticlePLoS pathogens2009

Connecting quorum sensing, c-di-GMP, pel polysaccharide, and biofilm formation in Pseudomonas aeruginosa through tyrosine phosphatase TpbA (PA3885).

Akihiro Ueda, Thomas K Wood

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 178 papers.

0numbers the graph read from it
0cells of the map it votes in
178citing papers in PubMed
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

178 citing papers in PubMed, 336 citations in OpenAlex.

  1. Mesolens imaging in microbiology.Essays in biochemistry · 2026
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  3. Journal of bacteriology · 2026
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  5. c-di-GMP is a key regulator of Pseudomonas aeruginosa response to UVA radiation.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026
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  6. Regulation of interbacterial interactions betweenbioRxiv : the preprint server for biology · 2026
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  13. Biofilm Dispersal inMicroorganisms · 2025
    Article
  14. Article
  15. Article
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  17. Review
  18. The adaptability ofFrontiers in cellular and infection microbiology · 2025
    Review
  19. Biofilm · 2024
    Article
  20. Article

118 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Akihiro UedaArtie McFerrin Department of Chemical Engineering, Texas A & M University, College Station, Texas, United States of America.
Thomas K Wood
Texas A&M University · US

Funding

Plant Biofilm Inhibitors to Discover Biofilm GenesR01EB003872 · NIBIB · TEXAS ENGINEERING EXPERIMENT STATION · PI WOOD, THOMAS K · 2005 to 2008
$1.2M
NIBIB NIH HHS R01 EB003872
6 · The paper itself

Abstract

With the opportunistic pathogen Pseudomonas aeruginosa, quorum sensing based on homoserine lactones was found to influence biofilm formation. Here we discern a mechanism by which quorum sensing controls biofilm formation by screening 5850 transposon mutants of P. aeruginosa PA14 for altered biofilm formation. This screen identified the PA3885 mutant, which had 147-fold more biofilm than the wild-type strain. Loss of PA3885 decreased swimming, abolished swarming, and increased attachment, although this did not affect production of rhamnolipids. The PA3885 mutant also had a wrinkly colony phenotype, formed pronounced pellicles, had substantially more aggregation, and had 28-fold more exopolysaccharide production. Expression of PA3885 in trans reduced biofilm formation and abolished aggregation. Whole transcriptome analysis showed that loss of PA3885 activated expression of the pel locus, an operon that encodes for the synthesis of extracellular matrix polysaccharide. Genetic screening identified that loss of PelABDEG and the PA1120 protein (which contains a GGDEF-motif) suppressed the phenotypes of the PA3885 mutant, suggesting that the function of the PA3885 protein is to regulate 3,5-cyclic diguanylic acid (c-di-GMP) concentrations as a phosphatase since c-di-GMP enhances biofilm formation by activating PelD, and c-di-GMP inhibits swarming. Loss of PA3885 protein increased cellular c-di-GMP concentrations; hence, PA3885 protein is a negative regulator of c-di-GMP production. Purified PA3885 protein has phosphatase activity against phosphotyrosine peptides and is translocated to the periplasm. Las-mediated quorum sensing positively regulates expression of the PA3885 gene. These results show that the PA3885 protein responds to AHL signals and likely dephosphorylates PA1120, which leads to reduced c-di-GMP production. This inhibits matrix exopolysaccharide formation, which leads to reduced biofilm formation; hence, we provide a mechanism for quorum sensing control of biofilm formation through the pel locus and suggest PA3885 should be named TpbA for tyrosine phosphatase related to biofilm formation and PA1120 should be TpbB.

Indexed as

Adhesins, BacterialBacterial ProteinsBiofilmsCyclic GMPGene Expression Regulation, BacterialGlycolipidsMutationPeriplasmPhenotypePolysaccharides, BacterialProtein Tyrosine PhosphatasesPseudomonas aeruginosaQuorum SensingSecond Messenger SystemsTyrosineAdhesins, BacterialBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPGlycolipidsPolysaccharides, BacterialProtein Tyrosine PhosphatasesrhamnolipidTyrosine

Identifiers

PMID19543378
PMCPMC2691606
OpenAlexW2080530421

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.