Evidence map›Paper›PMID 19542522›Full record

ArticleGlycobiology2009

A novel role for Gtb1p in glucose trimming of N-linked glycans.

Robert P Quinn, Sarah J Mahoney, Barrie M Wilkinson, David J Thornton, Colin J Stirling

Abstract read
In one paragraph

Article in Glycobiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Robert P QuinnFaculty of Life Sciences, University of Manchester, Oxford Road, Manchester M13 9PT, UK.
Sarah J Mahoney
Barrie M Wilkinson
David J Thornton
Colin J Stirling

Funding

Wellcome Trust
6 · The paper itself

Abstract

Glucosidase II (GluII) is a glycan-trimming enzyme active on nascent glycoproteins in the endoplasmic reticulum (ER). It trims the middle and innermost glucose residues (Glc2 and Glc1) from N-linked glycans. The monoglucosylated glycan produced by the first GluII trimming reaction is recognized by calnexin/calreticulin and serves as the signal for entry into this folding pathway. GluII is a heterodimer of alpha and beta subunits corresponding to yeast Gls2p and Gtb1p, respectively. While Gls2p contains the glucosyl hydrolase active site, the Gtb1p subunit has previously been shown to be essential for the Glc1 trimming event. Here we demonstrate that Gtb1p also determines the rate of Glc2 trimming. In order to further dissect these activities we mutagenized a number of conserved residues across the protein. Our data demonstrate that both the MRH and G2B domains of Gtb1p contribute to the Glc2 trimming event but that the MRH domain is essential for Glc1 trimming.

Indexed as

alpha-GlucosidasesAmino Acid SequenceCarbohydrate MetabolismCarbohydrate SequenceCatalytic DomainGlucoseGlycoproteinsModels, BiologicalMolecular Sequence DataMutagenesis, Site-DirectedOrganisms, Genetically ModifiedPolysaccharidesProtein Processing, Post-TranslationalProtein Structure, TertiarySaccharomyces cerevisiae ProteinsSequence Homology, Amino Acidalpha-GlucosidasesGlucoseGlycoproteinsGTB1 protein, S cerevisiaePolysaccharidesSaccharomyces cerevisiae Proteins

Identifiers

PMID19542522
PMCPMC4023292

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.