Evidence map›Paper›PMID 19536785›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2010

GABRR1 and GABRR2, encoding the GABA-A receptor subunits rho1 and rho2, are associated with alcohol dependence.

Xiaoling Xuei, Leah Flury-Wetherill, Danielle Dick, Alison Goate, Jay Tischfield, John Nurnberger, Marc Schuckit, John Kramer, Sam Kuperman, Victor Hesselbrock and 3 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Disruption ofiScience · 2026
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  8. Analysis of Modulation of theMolecular pharmacology · 2020
    Article
  9. Article
  10. An Emerging Circuit Pharmacology of GABATrends in pharmacological sciences · 2018
    Review
  11. Article
  12. Article
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  15. Article
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  17. Review
  18. Article
  19. Alcohol dependence: molecular and behavioral evidence.Trends in pharmacological sciences · 2014
    Review
  20. Proteomic approaches and identification of novel therapeutic targets for alcoholism.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 10 institutions in 1 country.

Xiaoling XueiDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana.
Leah Flury-WetherillDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana.
Danielle DickDepartment of Psychiatry, Virginia Commonwealth University, Richmond, Virginia.
Alison GoateDepartment of Psychiatry, Washington University School of Medicine, St. Louis, Missouri.
Jay TischfieldDepartment of Genetics, Rutgers University, Piscataway, New Jersey.
John NurnbergerInstitute of Psychiatric Research, Indiana University School of Medicine, Indianapolis, Indiana.
Marc SchuckitDepartment of Psychiatry, University of California-San Diego, San Diego, California.
John KramerPsychiatry Research, University of Iowa College of Medicine, Iowa City, Iowa.
Sam KupermanDivision of Child Psychiatry, University of Iowa Hospitals, Iowa City, Iowa.
Victor HesselbrockDepartment of Psychiatry, University of Connecticut Health Center, Farmington, Connecticut.
Bernice PorjeszHenri Begleiter Neurodynamics Laboratory, SUNY Downstate Medical Center, Brooklyn, New York.
Tatiana ForoudDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana.
Howard J EdenbergDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana.
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · USRutgers, The State University of New Jersey · USSUNY Downstate Health Sciences University · USUConn Health · USUniversity of California, San Diego · USUniversity of Iowa · USUniversity of Iowa Hospitals and Clinics · USVirginia Commonwealth University · USWashington University in St. Louis · US

Funding

Subject CollectionU10AA008401 · NIAAA · SUNY DOWNSTATE MEDICAL CENTER · PI Sarah Hartz · 1989 to 2026
$162.7M
Twin, molecular, and developmental approaches to understanding alcohol misuseK02AA018755 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI DICK, DANIELLE M · 2010 to 2019
$1.3M
NIAAA NIH HHS K02 AA018755NIAAA NIH HHS U10 AA008401NIAAA NIH HHS U10AA008401
6 · The paper itself

Abstract

The genes encoding several GABA-A receptor subunits, including GABRA2, have been associated with alcoholism, suggesting that variations in gaba signaling contribute to risk. Therefore, as part of a comprehensive evaluation of the GABA receptor genes, we evaluated the potential association of GABRR1 and GABRR2, which encode the rho1 and rho2 subunits of the pentameric GABA-A/GABA-C receptors. GABRR1 and GABRR2 lie in a head to tail orientation spanning 137 kb on chromosome 6q14-16. We genotyped 73 single nucleotide polymorphisms (SNPs), covering both genes and extending 31 kb upstream of GABRR2 and 95 kb downstream of GABRR1, in a sample of 1923 European Americans from 219 multiplex alcohol-dependent families. Family-based association analyses demonstrated that SNPs in both GABRR1 and GABRR2 were significantly associated with alcohol dependence. Among the associated SNPs was rs282129, a coding SNP (Met430Thr) in GABRR2. Secondary analysis using a median split for age of onset suggests that the association is strongest when the analysis is focused upon those with earlier onset of alcohol dependence. Haplotypes in each gene were significantly overtransmitted to family members who did not meet criteria for alcohol dependence (P < 0.04), and a haplotype in GABRR2 was significantly overtransmitted to family members who met a broader definition of alcoholism (P = 0.002) as well as DSM-IV dependence (P = 0.04).

Indexed as

Polymorphism, Single NucleotideAge of OnsetAlcoholismChromosome MappingGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLinkage DisequilibriumModels, GeneticMutationPhenotypeReceptors, GABA-AGABRR1 protein, humanGABRR2 protein, humanReceptors, GABA-A

Identifiers

PMID19536785
PMCPMC2829340
OpenAlexW2017788834

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.