Evidence map›Paper›PMID 19536094›Full record

ArticleBritish journal of cancer2009

Death-associated protein 3 is overexpressed in human thyroid oncocytic tumours.

C Jacques, J-F Fontaine, B Franc, D Mirebeau-Prunier, S Triau, F Savagner, Y Malthiery

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
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  8. Article
  9. Mitochondrial ribosomes in cancer.Seminars in cancer biology · 2017
    Review
  10. Article
  11. Article
  12. Resection of non-small cell lung cancers reverses tumor-induced gene expression changes in the peripheral immune system.Clinical cancer research : an official journal of the American Association for Cancer Research · 2011
    Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

C JacquesINSERM, U694, Centre Hospitalier Universitaire d'Angers, Laboratoire de Biochimie et Biologie Moléculaire, Angers, France. caroline.jacques@univ-angers.fr
J-F Fontaine
B Franc
D Mirebeau-Prunier
S Triau
F Savagner
Y Malthiery
Centre Hospitalier Universitaire d'Angers · FRUniversité d'Angers · FRInserm · FRLaboratoire Angevin de Recherche en Mathématiques · FRUniversité de Versailles Saint-Quentin-en-Yvelines · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe human death-associated protein 3 (hDAP3) is a GTP-binding constituent of the small subunit of the mitochondrial ribosome with a pro-apoptotic function.

methodsA search through publicly available microarray data sets showed 337 genes potentially coregulated with the DAP3 gene. The promoter sequences of these 337 genes and 70 out of 85 mitochondrial ribosome genes were analysed in silico with the DAP3 gene promoter sequence. The mitochondrial role of DAP3 was also investigated in the thyroid tumours presenting various mitochondrial contents.

resultsThe study revealed nine transcription factors presenting enriched motifs for these gene promoters, five of which are implicated in cellular growth (ELK1, ELK4, RUNX1, HOX11-CTF1, TAL1-ternary complex factor 3) and four in mitochondrial biogenesis (nuclear respiratory factor-1 (NRF-1), GABPA, PPARG-RXRA and estrogen-related receptor alpha (ESRRA)). An independent microarray data set showed the overexpression of ELK1, RUNX1 and ESRRA in the thyroid oncocytic tumours. Exploring the thyroid tumours, we found that DAP3 mRNA and protein expression is upregulated in tumours presenting a mitochondrial biogenesis compared with the normal tissue. ELK1 and ESRRA were also showed upregulated with DAP3.

conclusionELK1 and ESRRA may be considered as potential regulators of the DAP3 gene expression. DAP3 may participate in mitochondrial maintenance and play a role in the balance between mitochondrial homoeostasis and tumourigenesis.

Indexed as

Adenoma, OxyphilicApoptosis Regulatory ProteinsDNA Mismatch RepairGene Expression Regulation, NeoplasticHumansImmunohistochemistryMitochondriaPromoter Regions, GeneticProtein BiosynthesisReverse Transcriptase Polymerase Chain ReactionRibosomal ProteinsRibosomesRNA-Binding ProteinsRNA, MessengerThyroid NeoplasmsTranscription FactorsApoptosis Regulatory ProteinsDAP3 protein, humanRibosomal ProteinsRNA-Binding ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID19536094
PMCPMC2713694
OpenAlexW2024376580

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.