Evidence map›Paper›PMID 19535326›Full record

ArticleThe Journal of biological chemistry2009

TDP-43 depletion induces neuronal cell damage through dysregulation of Rho family GTPases.

Yohei Iguchi, Masahisa Katsuno, Jun-Ichi Niwa, Shin-Ichi Yamada, Jun Sone, Masahiro Waza, Hiroaki Adachi, Fumiaki Tanaka, Koh-Ichi Nagata, Nariko Arimura and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 99 citations in OpenAlex.

  1. Distinct single-nucleus RNA-seq changes among non-neuronal cells in ADNC, LATE-NC, and mixed pathologies.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
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  6. Context-dependent Interactors Regulate TDP-43 Dysfunction in ALS/FTLD.bioRxiv : the preprint server for biology · 2025
    Article
  7. Downregulation ofBrain communications · 2025
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  12. Review
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  14. Cryo-EM structures of four polymorphic TDP-43 amyloid cores.Nature structural & molecular biology · 2019
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  19. Review
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Yohei IguchiDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Masahisa KatsunoDepartments of Neurology, Showa-ku, Nagoya 466-8550; Institute for Advanced Research, Nagoya University, Nagoya 464-8601.
Jun-Ichi NiwaStroke Center, Aichi Medical University, Aichi 480-1195.
Shin-Ichi YamadaDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Jun SoneDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Masahiro WazaDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Hiroaki AdachiDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Fumiaki TanakaDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Koh-Ichi NagataDepartment of Molecular Neurobiology, Institute for Developmental Research, Aichi Human Service Center, Aichi 480-0838.
Nariko ArimuraTamagawa University Brain Science Institute, Tokyo 194-8610, Japan.
Takashi WatanabeInstitute for Advanced Research, Nagoya University, Nagoya 464-8601; Cell Pharmacology, Nagoya University Graduate School of Medicine, Showa-ku, Nagoya 466-8550.
Kozo KaibuchiCell Pharmacology, Nagoya University Graduate School of Medicine, Showa-ku, Nagoya 466-8550.
Gen SobueDepartments of Neurology, Showa-ku, Nagoya 466-8550.
Nagoya University Hospital · JPAichi Human Service Center · JPAichi Medical University · JPNagoya University · JPTamagawa University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 43-kDa TAR DNA-binding protein (TDP-43) is known to be a major component of the ubiquitinated inclusions characteristic of amyotrophic lateral sclerosis and frontotemporal lobar degeneration with ubiquitin-positive inclusions. Although TDP-43 is a nuclear protein, it disappears from the nucleus of affected neurons and glial cells, implicating TDP-43 loss of function in the pathogenesis of neurodegeneration. Here we show that the knockdown of TDP-43 in differentiated Neuro-2a cells inhibited neurite outgrowth and induced cell death. In knockdown cells, the Rho family members RhoA, Rac1, and Cdc42 GTPases were inactivated, and membrane localization of these molecules was reduced. In addition, TDP-43 depletion significantly suppressed protein geranylgeranylation, a key regulating factor of Rho family activity and intracellular localization. In contrast, overexpression of TDP-43 mitigated the cellular damage caused by pharmacological inhibition of geranylgeranylation. Furthermore administration of geranylgeranyl pyrophosphate partially restored cell viability and neurite outgrowth in TDP-43 knockdown cells. In summary, our data suggest that TDP-43 plays a key role in the maintenance of neuronal cell morphology and survival possibly through protein geranylgeranylation of Rho family GTPases.

Indexed as

Gene Expression RegulationAnimalsCaspasesCell Line, TumorCell SurvivalDNA-Binding ProteinsDose-Response Relationship, DrugMiceMicroscopy, FluorescenceModels, BiologicalNeuronsNeuropeptidesrac1 GTP-Binding Proteinrac GTP-Binding ProteinsrhoA GTP-Binding Proteinrho GTP-Binding ProteinsCaspasesDNA-Binding ProteinsNeuropeptidesrac1 GTP-Binding ProteinRac1 protein, mouserac GTP-Binding ProteinsrhoA GTP-Binding ProteinRhoA protein, mouserho GTP-Binding ProteinsRNA, Small Interfering

Identifiers

PMID19535326
PMCPMC2755930
OpenAlexW1964242395

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.