Evidence map›Paper›PMID 19535138›Full record

ReviewCell calcium2009

Viral calciomics: interplays between Ca2+ and virus.

Yubin Zhou, Teryl K Frey, Jenny J Yang

Abstract readReview
In one paragraph

Review in Cell calcium, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 187 papers.

0numbers the graph read from it
0cells of the map it votes in
187citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

187 citing papers in PubMed.

  1. Trial
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  16. SARS-CoV2 Nsp1 is a metal-dependent DNA and RNA endonuclease.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2024
    Article
  17. Article
  18. The CaJournal of virology · 2024
    Article
  19. Structural basis of human NOX5 activation.Nature communications · 2024
    Article
  20. Article

127 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yubin ZhouDepartment of Chemistry, Georgia State University, 50 Decatur St., Atlanta, GA 30303 USA.
Teryl K Frey
Jenny J Yang

Funding

MOLECULAR BIOLOGY OF RUBELLA VIRUSR01AI021389 · NIAID · GEORGIA STATE UNIVERSITY · PI FREY, TERYL K · 1987 to 2006
$1.7M
Rational Design and Analysis of Calcium Binding ProteinR01GM062999 · NIGMS · GEORGIA STATE UNIVERSITY · PI YANG, JENNY J · 2001 to 2005
$991k
NIAID NIH HHS R01 AI021389NIAID NIH HHS R01 AI21389NIGMS NIH HHS R01 GM062999NIGMS NIH HHS R01 GM 62999
6 · The paper itself

Abstract

Ca(2+) is one of the most universal and versatile signaling molecules and is involved in almost every aspect of cellular processes. Viruses are adept at utilizing the universal Ca(2+) signal to create a tailored cellular environment that meets their own demands. This review summarizes most of the known mechanisms by which viruses perturb Ca(2+) homeostasis and utilize Ca(2+) and cellular Ca(2+)-binding proteins to their benefit in their replication cycles. Ca(2+) plays important roles in virion structure formation, virus entry, viral gene expression, posttranslational processing of viral proteins and virion maturation and release. As part of the review, we introduce an algorithm to identify linear "EF-hand" Ca(2+)-binding motifs which resulted in the prediction of a total of 93 previously unrecognized Ca(2+)-binding motifs in virus proteins. Many of these proteins are nonstructural proteins, a class of proteins among which Ca(2+) interactions had not been formerly appreciated. The presence of linear Ca(2+)-binding motifs in viral proteins enlarges the spectrum of Ca(2+)-virus interplay and expands the total scenario of viral calciomics.

Indexed as

CalciumCalcium-Binding ProteinsCalcium ChannelsCalcium SignalingCell MembraneEndoplasmic ReticulumHIV-1HomeostasisHost-Pathogen InteractionsHumansMembrane Potential, MitochondrialViral ProteinsVirus DiseasesCalciumCalcium-Binding ProteinsCalcium ChannelsViral Proteins

Identifiers

PMID19535138
PMCPMC3449087

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.