Evidence map›Paper›PMID 19531600›Full record

ArticleThe Plant cell2009

Mutation of the membrane-associated M1 protease APM1 results in distinct embryonic and seedling developmental defects in Arabidopsis.

Wendy Ann Peer, Fazeeda N Hosein, Anindita Bandyopadhyay, Srinivas N Makam, Marisa S Otegui, Gil-Je Lee, Joshua J Blakeslee, Yan Cheng, Boosaree Titapiwatanakun, Bahktiyor Yakubov and 2 more

Erratum issuedAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Construction of prediction models for growth traits of soybean cultivars based on phenotyping in diverse genotype and environment combinations.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022
    Article
  6. Review
  7. Naphthylphthalamic acid associates with and inhibits PIN auxin transporters.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Article
  9. A Retro-Perspective on Auxin Transport.Frontiers in plant science · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Wendy Ann PeerDepartment of Horticulture, Purdue University, West Lafayette, Indiana 47907, USA.
Fazeeda N Hosein
Anindita Bandyopadhyay
Srinivas N Makam
Marisa S Otegui
Gil-Je Lee
Joshua J Blakeslee
Yan Cheng
Boosaree Titapiwatanakun
Bahktiyor Yakubov
Bharat Bangari
Angus S Murphy

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Aminopeptidase M1 (APM1), a single copy gene in Arabidopsis thaliana, encodes a metallopeptidase originally identified via its affinity for, and hydrolysis of, the auxin transport inhibitor 1-naphthylphthalamic acid (NPA). Mutations in this gene result in haploinsufficiency. Loss-of-function mutants show irregular, uncoordinated cell divisions throughout embryogenesis, affecting the shape and number of cotyledons and the hypophysis, and is seedling lethal at 5 d after germination due to root growth arrest. Quiescent center and cell cycle markers show no signals in apm1-1 knockdown mutants, and the ground tissue specifiers SHORTROOT and SCARECROW are misexpressed or mislocalized. apm1 mutants have multiple, fused cotyledons and hypocotyls with enlarged epidermal cells with cell adhesion defects. apm1 alleles show defects in gravitropism and auxin transport. Gravistimulation decreases APM1 expression in auxin-accumulating root epidermal cells, and auxin treatment increases expression in the stele. On sucrose gradients, APM1 occurs in unique light membrane fractions. APM1 localizes at the margins of Golgi cisternae, plasma membrane, select multivesicular bodies, tonoplast, dense intravacuolar bodies, and maturing metaxylem cells. APM1 associates with brefeldin A-sensitive endomembrane structures and the plasma membrane in cortical and epidermal cells. The auxin-related phenotypes and mislocalization of auxin efflux proteins in apm1 are consistent with biochemical interactions between APM1 and NPA.

Indexed as

MutationAminopeptidasesArabidopsisArabidopsis ProteinsBiological TransportCell DivisionCell MembraneCotyledonGene Expression Regulation, PlantGene SilencingGolgi ApparatusGravitropismHypocotylIndoleacetic AcidsMembrane ProteinsMicroscopy, Electron, Transmissionalpha-naphthylphthalamic acidAminopeptidasesArabidopsis ProteinsATAPP1 protein, ArabidopsisIndoleacetic AcidsMembrane ProteinsPhthalimides

Identifiers

PMID19531600
PMCPMC2714933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.