Evidence map›Paper›PMID 19531597›Full record

ArticleThe Plant cell2009

A pivotal role of the basic leucine zipper transcription factor bZIP53 in the regulation of Arabidopsis seed maturation gene expression based on heterodimerization and protein complex formation.

Rosario Alonso, Luis Oñate-Sánchez, Fridtjof Weltmeier, Andrea Ehlert, Isabel Diaz, Katrin Dietrich, Jesús Vicente-Carbajosa, Wolfgang Dröge-Laser

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 228 citations in OpenAlex.

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  11. Genome-Wide Analysis of C/S1-bZIP Subfamilies inInternational journal of molecular sciences · 2024
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  15. Conservative mechanism through various rapeseed (Frontiers in plant science · 2024
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  19. Wheat bZIPC1 interacts with FT2 and contributes to the regulation of spikelet number per spike.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Rosario AlonsoCentro de Biotecnología y Genómica de Plantas Universidad Politécnica de Madrid, Escuela Técnica Superior Ingenieros Agrónomos, 28223 Pozuelo de Alarcón, Madrid, Spain.
Luis Oñate-Sánchez
Fridtjof Weltmeier
Andrea Ehlert
Isabel Diaz
Katrin Dietrich
Jesús Vicente-Carbajosa
Wolfgang Dröge-Laser
University of Göttingen · DECentre for Plant Biotechnology and Genomics · ESUniversidad Politécnica de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription of Arabidopsis thaliana seed maturation (MAT) genes is controlled by members of several transcription factor families, such as basic leucine zippers (bZIPs), B3s, MYBs, and DOFs. In this work, we identify Arabidopsis bZIP53 as a novel transcriptional regulator of MAT genes. bZIP53 expression in developing seeds precedes and overlaps that of its target genes. Gain- and loss-of-function approaches indicate a correlation between the amount of bZIP53 protein and MAT gene expression. Specific in vivo and in vitro binding of bZIP53 protein to a G-box element in the albumin 2S2 promoter is demonstrated. Importantly, heterodimerization with bZIP10 or bZIP25, previously described bZIP regulators of MAT gene expression, significantly enhances DNA binding activity and produces a synergistic increase in target gene activation. Full-level target gene activation is strongly correlated with the ratio of the correspondent bZIP heterodimerization partners. Whereas bZIP53 does not interact with ABI3, a crucial transcriptional regulator in Arabidopsis seeds, ternary complex formation between the bZIP heterodimers and ABI3 increases the expression of MAT genes in planta. We therefore propose that heterodimers containing bZIP53 participate in enhanceosome formation to produce a dramatic increase in MAT gene transcription.

Indexed as

Gene Expression Regulation, Plant2S Albumins, PlantArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsBinding SitesConsensus SequenceDimerizationPromoter Regions, GeneticProtein Interaction MappingSeeds2S Albumins, PlantArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsbZIP53 protein, Arabidopsis

Identifiers

PMID19531597
PMCPMC2714925
OpenAlexW2172292721

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.