Evidence map›Paper›PMID 19531563›Full record

ArticleMolecular cancer research : MCR2009

Identification of a novel DNA binding site and a transcriptional target for activating transcription factor 5 in c6 glioma and mcf-7 breast cancer cells.

Guangfu Li, Wenhong Li, James M Angelastro, Lloyd A Greene, David X Liu

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer research : MCR, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

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  13. A Synthetic Cell-Penetrating Dominant-Negative ATF5 Peptide Exerts Anticancer Activity against a Broad Spectrum of Treatment-Resistant Cancers.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Guangfu LiDepartment of Neural and Behavioral Sciences, Penn State University College of Medicine, Hershey, 17033, USA.
Wenhong Li
James M Angelastro
Lloyd A Greene
David X Liu
Columbia University · USPennsylvania State University · US

Funding

NEUROTROPHIC FACTOR DEPRIVATION AND NEURONAL CELL DEATHR01NS033689 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GREENE, LLOYD A · 1995 to 2017
$8.9M
NINDS NIH HHS R01 NS033689
6 · The paper itself

Abstract

Recent reports indicate that the activating transcription factor 5 (ATF5) is required for the survival of cancer cells but not for noncancer cells. However, the mechanisms by which ATF5 regulates genes and promotes cell survival are not clear. Using a cyclic amplification and selection of targets (CASTing) approach, we identified a novel ATF5 consensus DNA binding sequence. We show in C6 glioma and MCF-7 breast cancer cells that ATF5 occupies this sequence and that ATF5 activates reporter gene expression driven by this site. Conversely, reporter activity is diminished when ATF5 activity is blocked or when ATF5 expression is down-regulated by serum withdrawal. We further show that early growth response factor 1 (Egr-1), whose promoter contains two adjacent ATF5 consensus binding sites at a conserved promoter position in rat, mouse, and human, is targeted and regulated by ATF5 in C6 and MCF-7 cells. These data provide new insight on the mechanisms by which ATF5 promotes gene regulation and cancer-specific cell survival.

Indexed as

Activating Transcription FactorsAnimalsBase SequenceBinding SitesBreast NeoplasmsCell Line, TumorConsensus SequenceEarly Growth Response Protein 1Gene Expression Regulation, NeoplasticGliomaHumansMolecular Sequence DataMultiprotein ComplexesProtein BindingRatsSequence AlignmentActivating Transcription FactorsATF5 protein, humanAtf5 protein, ratEarly Growth Response Protein 1Multiprotein Complexes

Identifiers

PMID19531563
PMCPMC2880174
OpenAlexW2167061296

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.