ArticleAnalytical chemistry2009
Time-of-flight secondary ion mass spectrometry imaging of subcellular lipid heterogeneity: Poisson counting and spatial resolution.
Article in Analytical chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- Adipose tissue composition determines its computed tomography radiodensity.European radiology · 2024Article
- Single-Cell Metabolic Profiling of Macrophages Using 3D OrbiSIMS: Correlations with Phenotype.Analytical chemistry · 2022Article
- Unravelling Prostate Cancer Heterogeneity Using Spatial Approaches to Lipidomics and Transcriptomics.Cancers · 2022Review
- A mathematical comparison of non-negative matrix factorization related methods with practical implications for the analysis of mass spectrometry imaging data.Rapid communications in mass spectrometry : RCM · 2021Article
- A reformulation of pLSA for uncertainty estimation and hypothesis testing in bio-imaging.Bioinformatics (Oxford, England) · 2020Article
- ToF-SIMS 3D Analysis of Thin Films Deposited in High Aspect Ratio Structures via Atomic Layer Deposition and Chemical Vapor Deposition.Nanomaterials (Basel, Switzerland) · 2019Article
- Quantifying biological samples using Linear Poisson Independent Component Analysis for MALDI-ToF mass spectra.Bioinformatics (Oxford, England) · 2018Article
- Improving secondary ion mass spectrometry image quality with image fusion.Journal of the American Society for Mass Spectrometry · 2014Article
- Correlated imaging--a grand challenge in chemical analysis.The Analyst · 2013Review
- Image and Spectral Processing for ToF-SIMS Analysis of Biological Materials.Mass spectrometry (Tokyo, Japan) · 2013Article
- Fluorinated colloidal gold immunolabels for imaging select proteins in parallel with lipids using high-resolution secondary ion mass spectrometry.Bioconjugate chemistry · 2012Article
- Identifying individual cell types in heterogeneous cultures using secondary ion mass spectrometry imaging with C60 etching and multivariate analysis.Analytical chemistry · 2012Article
- Compositional mapping of the surface and interior of mammalian cells at submicrometer resolution.Analytical chemistry · 2011Article
- From pixel to voxel: a deeper view of biological tissue by 3D mass spectral imaging.Bioanalysis · 2011Review
Corrections and comments
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Authors and funding
7 authors.
Funding
Abstract
Mass spectrometric imaging is a powerful tool to interrogate biological complexity. One such technique, time-of-flight secondary ion mass spectrometry (TOF-SIMS) imaging, has been successfully utilized for subcellular imaging of cell membrane components. In order for this technique to provide insight into biological processes, it is critical to characterize the figures of merit. Because a SIMS instrument counts individual events, the precision of the measurement is controlled by counting statistics. As the analysis area decreases, the number of molecules available for analysis diminishes. This becomes critical when imaging subcellular features; it limits the information obtainable, resulting in images with only a few counts of interest per pixel. Many features observed in low intensity images are artifacts of counting statistics, making validation of these features crucial to arriving at accurate conclusions. With TOF-SIMS imaging, the experimentally attainable spatial resolution is a function of the molecule of interest, sample matrix, concentration, primary ion, instrument transmission, and spot size of the primary ion beam. A model, based on Poisson statistics, has been developed to validate SIMS imaging data when signal is limited. This model can be used to estimate the effective spatial resolution and limits of detection prior to analysis, making it a powerful tool for tailoring future investigations. In addition, the model allows comparison of pixel-to-pixel intensity and can be used to validate the significance of observed image features. The implications and capabilities of the model are demonstrated by imaging the cell membrane of resting RBL-2H3 mast cells.
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