Evidence map›Paper›PMID 19530687›Full record

ArticleAnalytical chemistry2009

Time-of-flight secondary ion mass spectrometry imaging of subcellular lipid heterogeneity: Poisson counting and spatial resolution.

Paul D Piehowski, Angel M Davey, Michael E Kurczy, Erin D Sheets, Nicholas Winograd, Andrew G Ewing, Michael L Heien

Abstract read
In one paragraph

Article in Analytical chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Improving secondary ion mass spectrometry image quality with image fusion.Journal of the American Society for Mass Spectrometry · 2014
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Paul D PiehowskiDepartment of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Angel M Davey
Michael E Kurczy
Erin D Sheets
Nicholas Winograd
Andrew G Ewing
Michael L Heien

Funding

MOLECULAR IMAGING OF BIOMATERIALS - SINGLE CELLSR01EB002016 · NIBIB · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI WINOGRAD, NICHOLAS · 2003 to 2012
$4.1M
Nanostructural Dynamics of Biomembranes in Immunoreceptor SignalingR21AG030949 · NIA · UNIVERSITY OF MINNESOTA · PI SHEETS, ERIN D · 2007 to 2008
$207k
NIA NIH HHS AG030949NIA NIH HHS R21 AG030949NIBIB NIH HHS 2R01EB002016-16NIBIB NIH HHS R01 EB002016
6 · The paper itself

Abstract

Mass spectrometric imaging is a powerful tool to interrogate biological complexity. One such technique, time-of-flight secondary ion mass spectrometry (TOF-SIMS) imaging, has been successfully utilized for subcellular imaging of cell membrane components. In order for this technique to provide insight into biological processes, it is critical to characterize the figures of merit. Because a SIMS instrument counts individual events, the precision of the measurement is controlled by counting statistics. As the analysis area decreases, the number of molecules available for analysis diminishes. This becomes critical when imaging subcellular features; it limits the information obtainable, resulting in images with only a few counts of interest per pixel. Many features observed in low intensity images are artifacts of counting statistics, making validation of these features crucial to arriving at accurate conclusions. With TOF-SIMS imaging, the experimentally attainable spatial resolution is a function of the molecule of interest, sample matrix, concentration, primary ion, instrument transmission, and spot size of the primary ion beam. A model, based on Poisson statistics, has been developed to validate SIMS imaging data when signal is limited. This model can be used to estimate the effective spatial resolution and limits of detection prior to analysis, making it a powerful tool for tailoring future investigations. In addition, the model allows comparison of pixel-to-pixel intensity and can be used to validate the significance of observed image features. The implications and capabilities of the model are demonstrated by imaging the cell membrane of resting RBL-2H3 mast cells.

Indexed as

AnimalsCell LineCell MembraneCholesterolIntracellular SpaceLipid MetabolismLipidsMass SpectrometryMast CellsPoisson DistributionProbabilitySurface PropertiesCholesterolLipids

Identifiers

PMID19530687
PMCPMC2758657

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.