Evidence map›Paper›PMID 19529833›Full record

ArticleJournal of applied crystallography2008

Cryocrystallography in capillaries: critical glycerol concentrations and cooling rates.

Matthew Warkentin, Valentina Stanislavskaia, Katherine Hammes, Robert E Thorne

Abstract read
In one paragraph

Article in Journal of applied crystallography, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Cryopreservation of NK and T Cells Without DMSO for Adoptive Cell-Based Immunotherapy.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2021
    Review
  5. Ice in biomolecular cryocrystallography.Acta crystallographica. Section D, Structural biology · 2021
    Article
  6. Article
  7. A standardized technique for high-pressure cooling of protein crystals.Acta crystallographica. Section D, Structural biology · 2017
    Article
  8. Crystal Dehydration in Membrane Protein Crystallography.Advances in experimental medicine and biology · 2016
    Article
  9. Practical macromolecular cryocrystallography.Acta crystallographica. Section F, Structural biology communications · 2015
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Slow cooling and temperature-controlled protein crystallography.Journal of structural and functional genomics · 2010
    Article
  15. Slow cooling of protein crystals.Journal of applied crystallography · 2009
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Matthew Warkentin
Valentina Stanislavskaia
Katherine Hammes
Robert E Thorne

Funding

New Approaches to Radiation Damage and CryoprotectionR01GM065981 · NIGMS · CORNELL UNIVERSITY ITHACA · PI THORNE, ROBERT E. · 2002 to 2010
$1.8M
NIGMS NIH HHS R01 GM065981
6 · The paper itself

Abstract

Capillary tubes have many advantages over multi-well plates for macromol-ecular crystal growth and handling, including the possibility of in situ structure determination. To obtain complete high-resolution X-ray data sets, cryopreservation protocols must be developed to prevent crystalline ice formation and preserve macromolecular crystal order. The minimum glycerol concentrations required to vitrify aqueous solutions during plunging into liquid nitrogen and liquid propane have been determined for capillary diameters from 3.3 mm to 150 microm. For the smallest diameter, the required glycerol concentrations are 30%(w/v) in nitrogen and 20%(w/v) in propane, corresponding to cooling rates of approximately 800 and approximately 7000 K s(-1), respectively. These concentrations are much larger than are required in current best practice using crystals in loops or on microfabricated mounts. In additon, the relation between the minimum cooling rate for vitrification and glycerol concentration has been estimated; this relation is of fundamental importance in developing rational cryopreservation protocols.

Identifiers

PMID19529833
PMCPMC2648606

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.