ArticleMolecular plant pathology2009
Dynamics in the tomato root transcriptome on infection with the potato cyst nematode Globodera rostochiensis.
Article in Molecular plant pathology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Basal Differences in the Transcriptional Profiles of Tomato Roots Associated with the Presence/Absence of the Resistance GenePlants (Basel, Switzerland) · 2026Article
- Proteomic Dynamics in the Interaction of Susceptible and Resistant Tomato Cultivars and Potato Cyst Nematodes.International journal of molecular sciences · 2025Article
- Identification of genes involved in the tomato root response to Globodera rostochiensis parasitism under varied light conditions.Journal of applied genetics · 2025Article
- Identification of genes governing resistance to PCN (Globodera rostochiensis) through transcriptome analysis in Solanum tuberosum.Functional & integrative genomics · 2023Article
- RNA-Seq of Cyst Nematode Infestation of Potato (Plants (Basel, Switzerland) · 2022Article
- Repulsive response ofFrontiers in microbiology · 2022Article
- Profiling the Proteome of Cyst Nematode-Induced Syncytia on Tomato Roots.International journal of molecular sciences · 2021Article
- RNA-Seq revealed that infection with white tip nematodes could downregulate rice photosynthetic genes.Functional & integrative genomics · 2020Article
- The Role of Programmed Cell Death RegulatorFrontiers in plant science · 2018Article
- Ethylene response pathway modulates attractiveness of plant roots to soybean cyst nematode Heterodera glycines.Scientific reports · 2017Article
- Microaspiration ofPlant methods · 2017Article
- Systemic above- and belowground cross talk: hormone-based responses triggered by Heterodera schachtii and shoot herbivores in Arabidopsis thaliana.Journal of experimental botany · 2015Article
- Role of stress-related hormones in plant defence during early infection of the cyst nematode Heterodera schachtii in Arabidopsis.The New phytologist · 2015Article
- Suppression of NGB and NAB/ERabp1 in tomato modifies root responses to potato cyst nematode infestation.Molecular plant pathology · 2015Article
- Analysis of tomato gene promoters activated in syncytia induced in tomato and potato hairy roots by Globodera rostochiensis.Transgenic research · 2013Article
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8 authors.
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Abstract
Plant parasitic nematodes infect roots and trigger the formation of specialized feeding sites by substantial reprogramming of the developmental process of root cells. In this article, we describe the dynamic changes in the tomato root transcriptome during early interactions with the potato cyst nematode Globodera rostochiensis. Using amplified fragment length polymorphism-based mRNA fingerprinting (cDNA-AFLP), we monitored 17 600 transcript-derived fragments (TDFs) in infected and uninfected tomato roots, 1-14 days after inoculation with nematode larvae. Six hundred and twenty-four TDFs (3.5%) showed significant differential expression on nematode infection. We employed GenEST, a computer program which links gene expression profiles generated by cDNA-AFLP and databases of cDNA sequences, to identify 135 tomato sequences. These sequences were grouped into eight functional categories based on the presence of genes involved in hormone regulation, plant pathogen defence response, cell cycle and cytoskeleton regulation, cell wall modification, cellular signalling, transcriptional regulation, primary metabolism and allocation. The presence of unclassified genes was also taken into consideration. This article describes the responsiveness of numerous tomato genes hitherto uncharacterized during infection with endoparasitic cyst nematodes. The analysis of transcriptome profiles allowed the sequential order of expression to be dissected for many groups of genes and the genes to be connected with the biological processes involved in compatible interactions between the plant and nematode.
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