Evidence map›Paper›PMID 19523066›Full record

ArticleInsect molecular biology2009

A lepidopteran orthologue of reaper reveals functional conservation and evolution of IAP antagonists.

B Bryant, Y Zhang, C Zhang, C P Santos, R J Clem, L Zhou

Open access · greenAbstract read
In one paragraph

Article in Insect molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Deep Conservation ofInsects · 2021
    Article
  4. Pro-Apoptotic Function Analysis of the Reaper Homologue IBM1 inInternational journal of molecular sciences · 2020
    Article
  5. Azadirachtin Affects the Growth ofFrontiers in physiology · 2018
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

B BryantKansas State University, Manhattan, USA.
Y Zhang
C Zhang
C P Santos
R J Clem
L Zhou
University of Florida Health · USKansas State University · US

Funding

Probing Complexity of UV Induced Apoptosis in DrosophilaR01CA095542 · NCI · UNIVERSITY OF FLORIDA · PI ZHOU, LEI · 2003 to 2007
$1.2M
Systematic analysis of cell death regulation in mosquitoesR56AI079074 · NIAID · UNIVERSITY OF FLORIDA · PI ZHOU, LEI · 2008 to 2009
$652k
Apoptosis as an anti-viral response in mosquito midgutR21AI067642 · NIAID · KANSAS STATE UNIVERSITY · PI CLEM, ROLLIE J · 2006 to 2007
$395k
Comparative Analysis of Cell Death Regulation in MosquitoesR21AI067555 · NIAID · UNIVERSITY OF FLORIDA · PI ZHOU, LEI · 2006 to 2007
$394k
NCI NIH HHS R01 CA095542NIAID NIH HHS R21 AI067555NIAID NIH HHS R21 AI067642NIAID NIH HHS R56 AI079074
6 · The paper itself

Abstract

Genetic studies in Drosophila melanogaster have revealed that inhibitor of apoptosis (IAP) proteins and IAP antagonists such as reaper play a pivotal role in controlling cell death in insects. Interestingly, although the sequences and structures of IAPs are highly conserved, the sequence of IAP antagonists diverged very rapidly during evolution, making their identification difficult. Using a customized bioinformatics approach, we identified an IAP antagonist, IAP-binding motif 1 (Ibm1), from the genome of the silkworm Bombyx mori. This is the first reaper/grim orthologue identified in a nondipteran insect. Previous analysis indicated that both Reaper and Grim induce cell death through their N-terminal IBM as well as the Grim_helix3 (GH3) domain. Functional studies indicated that Ibm1 binds to an IAP protein from B. mori, BmIAP1, and induces apoptosis in insect cells via the IAP-binding motif, a seven amino acid sequence that is highly conserved in all IAP antagonists. Interestingly, Ibm1 also contains a region that is a statistically significant match to the GH3 domain. Mutational analysis indicated that the GH3-like motif in Ibm1 has an important supportive role in IAP-antagonist function and can trigger cell death under certain conditions.

Indexed as

Amino Acid SequenceAnimalsApoptosisBombyxCell LineConserved SequenceDrosophila ProteinsEvolution, MolecularGene Expression Regulation, DevelopmentalInsect ProteinsMolecular Sequence DataProtein Interaction Domains and MotifsSequence Analysis, DNADrosophila ProteinsInsect Proteinsrpr protein, Drosophila

Identifiers

PMID19523066
PMCPMC2926934
OpenAlexW2118732328

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.