Evidence map›Paper›PMID 19521348›Full record

ArticleObesity (Silver Spring, Md.)2009

Evidence for three novel QTLs for adiposity on chromosome 2 with epistatic interactions: the NHLBI Family Heart Study.

Mary F Feitosa, Kari E North, Richard H Myers, James S Pankow, Ingrid B Borecki

Open access · greenAbstract read
In one paragraph

Article in Obesity (Silver Spring, Md.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Genomics of body fat distribution.Journal of genetics · 2021
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Mary F FeitosaDivision of Statistical Genomics, Center for Genome Sciences, Washington University School of Medicine, St Louis, Missouri, USA. mfeitosa@wustl.edu
Kari E North
Richard H Myers
James S Pankow
Ingrid B Borecki
Washington University in St. Louis · USBoston University · USUniversity of Minnesota · USUniversity of North Carolina at Chapel Hill · US

Funding

ZINC AND ISCHEMIC BRAIN INJURYP01NS032636 · NINDS · WASHINGTON UNIVERSITY · PI LEE, JIN-MOO · 1995 to 2010
$13.2M
Intestinal bacterial metagenome in pediatric NAFLDR01DK088831 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI SALZMAN, NITA H, WEINSTOCK, GEORGE M · 2012 to 2016
$7.0M
Genetic Architecture of Adiposity in Multiple Large CohortsR01DK089256 · NIDDK · WASHINGTON UNIVERSITY · PI BARANSKI, THOMAS JOHN, LIU, CHING-TI · 2010 to 2016
$4.6M
Epidemiological and Genetic Studies of Body Mass IndexR01HL068891 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI MYERS, RICHARD H · 2002 to 2007
$4.0M
Genetic Epidemiology of Metabolic Diseases of ObesityR01DK075681 · NIDDK · WASHINGTON UNIVERSITY · PI BORECKI, INGRID BERNADETTE · 2008 to 2011
$2.1M
FHS-Molecular Genetics &Genetic EpidemiologyR01HL056567 · NHLBI · WASHINGTON UNIVERSITY · PI PROVINCE, MICHAEL A · 2001 to 2003
$1.9M
Mapping Adiposity QTLS in the NHLBI Family Heart StudyR01DK068336 · NIDDK · WASHINGTON UNIVERSITY · PI BORECKI, INGRID BERNADETTE · 2004 to 2006
$1.7M
NHLBI NIH HHS R01 HL056567NHLBI NIH HHS R01 HL068891NHLBI NIH HHS R0-1 HL068891-06NIDDK NIH HHS R01 DK068336NIDDK NIH HHS R01 DK075681NIDDK NIH HHS R01 DK088831NIDDK NIH HHS R01 DK089256NINDS NIH HHS P01 NS032636
6 · The paper itself

Abstract

We sought to identify quantitative trait loci (QTLs) by genome-wide linkage analysis for BMI and waist circumference (WC) exploring various strategies to address heterogeneity including covariate adjustments and complex models based on epistatic components of variance. Because cholesterol-lowering drugs and diabetes medications may affect adiposity and risk of coronary heart disease, we excluded subjects medicated for hypercholesterolemia and hyperglycemia. The evidence of linkage increased on 2p25 (BMI: lod = 1.59 vs. 2.43, WC: lod = 1.32 vs. 2.26). Because environmental and/or genetic components could mask the effect of a specific locus, we investigated further whether a QTL could influence adiposity independently of lipid pathway and dietary habits. Strong evidence of linkage on 2p25 (BMI: lod = 4.31; WC: lod = 4.23) was found using Willet's dietary factors and lipid profile together with age and sex in adjustment. It suggests that lipid profile and dietary habits are confounding factors for detecting a 2p25 QTL for adiposity. Because evidence of linkage has been previously detected for BMI on 7q34 and 13q14 in National Heart, Lung, and Blood Institute Family Heart Study (NHLBI FHS), and for diabetes on 15q13, we investigated epistasis between chromosome 2 and these loci. Significant epistatic interactions were found between QTLs 2p25 and 7q34, 2q37 and 7q34, 2q31 and 13q14, and 2q31-q36 and 15q13. These results suggest multiple pathways and factors involving genetic and environmental effects influencing adiposity. By taking some of these known factors into account, we clarified our linkage evidence of a QTL on 2p25 influencing BMI and WC. The 2p25, 2q24-q31, and 2q36-q37 showed evidence of epistatic interaction with 7q34, 13q14, and 15q13.

Indexed as

Chromosomes, Human, Pair 2Epistasis, GeneticQuantitative Trait LociAdiposityBody Mass IndexChromosomesDietGenome-Wide Association StudyHumansLipid MetabolismLod ScoreNational Heart, Lung, and Blood Institute (U.S.)ObesityPedigreeUnited StatesWaist Circumference

Identifiers

PMID19521348
PMCPMC4976636
OpenAlexW2037669105

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.