ArticleJournal of molecular evolution2009
Phylogeny of Banana Streak Virus reveals recent and repetitive endogenization in the genome of its banana host (Musa sp.).
Article in Journal of molecular evolution, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
19 citing papers in PubMed, 57 citations in OpenAlex.
- Going wild in banana breeding enables Fusarium-resistant hybrids with improved fruit quality.Nature communications · 2026Article
- Article
- Distribution and Location of BEVs in Different Genotypes of Bananas Reveal the Coevolution of BSVs and Bananas.International journal of molecular sciences · 2023Article
- Homing in on Endogenous Badnaviral Elements: Development of Multiplex PCR-DGGE for Detection and Rapid Identification of Badnavirus Sequences in Yam Germplasm.Frontiers in plant science · 2022Article
- Badnaviruses and banana genomes: a long association sheds light on Musa phylogeny and origin.Molecular plant pathology · 2021Article
- Virus-Bacteria Interactions: Implications and Potential for the Applied and Agricultural Sciences.Viruses · 2018Review
- PCR-DGGE Analysis: Unravelling Complex Mixtures of Badnavirus Sequences Present in Yam Germplasm.Viruses · 2017Article
- Badnaviruses: The Current Global Scenario.Viruses · 2016Review
- How endogenous plant pararetroviruses shed light on Musa evolution.Annals of botany · 2016Article
- Move over, bacteria! Viruses make their mark as mutualistic microbial symbionts.Journal of virology · 2015Review
- Subpopulation level variation of banana streak viruses in India and common evolution of banana and sugarcane badnaviruses.Virus genes · 2015Article
- The genome of African yam (Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct Badnavirus species.Molecular plant pathology · 2014Article
- Evasion of short interfering RNA-directed antiviral silencing in Musa acuminata persistently infected with six distinct banana streak pararetroviruses.Journal of virology · 2014Article
- Three infectious viral species lying in wait in the banana genome.Journal of virology · 2013Article
- Genetic diversity of Sugarcane bacilliform virus isolates infecting Saccharum spp. in India.Virus genes · 2013Article
- Article
- The GCP molecular marker toolkit, an instrument for use in breeding food security crops.Molecular breeding : new strategies in plant improvement · 2011Article
- Evolution of endogenous sequences of banana streak virus: what can we learn from banana (Musa sp.) evolution?Journal of virology · 2010Article
- A novel endogenous badnavirus exists in Alhagi sparsifolia.Journal of Zhejiang University. Science. BArticle
Corrections and comments
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Authors and funding
2 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Banana streak virus (BSV) is a plant dsDNA pararetrovirus (family Caulimoviridae, genus badnavirus). Although integration is not an essential step in the BSV replication cycle, the nuclear genome of banana (Musa sp.) contains BSV endogenous pararetrovirus sequences (BSV EPRVs). Some BSV EPRVs are infectious by reconstituting a functional viral genome. Recent studies revealed a large molecular diversity of episomal BSV viruses (i.e., nonintegrated) while others focused on BSV EPRV sequences only. In this study, the evolutionary history of badnavirus integration in banana was inferred from phylogenetic relationships between BSV and BSV EPRVs. The relative evolution rates and selective pressures (d(N)/d(S) ratio) were also compared between endogenous and episomal viral sequences. At least 27 recent independent integration events occurred after the divergence of three banana species, indicating that viral integration is a recent and frequent phenomenon. Relaxation of selective pressure on badnaviral sequences that experienced neutral evolution after integration in the plant genome was recorded. Additionally, a significant decrease (35%) in the EPRV evolution rate was observed compared to BSV, reflecting the difference in the evolution rate between episomal dsDNA viruses and plant genome. The comparison of our results with the evolution rate of the Musa genome and other reverse-transcribing viruses suggests that EPRVs play an active role in episomal BSV diversity and evolution.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.