Evidence map›Paper›PMID 19515549›Full record

ReviewCurrent opinion in cell biology2009

Turnover of organelles by autophagy in yeast.

Jean-Claude Farré, Roswitha Krick, Suresh Subramani, Michael Thumm

Abstract readReview
In one paragraph

Review in Current opinion in cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 3 pooled it
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 3 syntheses or guidelines pooled it, 127 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Guideline
  4. Review
  5. Mechanism and regulation of mitophagy in liver diseases: a review.Frontiers in cell and developmental biology · 2025
    Review
  6. Autophagy: regulating the seesaw of bone-fat balance.Frontiers in cell and developmental biology · 2025
    Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Selective autophagy as a therapeutic target for neurological diseases.Cellular and molecular life sciences : CMLS · 2021
    Review
  12. Review
  13. Review
  14. Article
  15. The MicroalgaPlant physiology · 2020
    Article
  16. Mitophagy, Mitochondrial Homeostasis, and Cell Fate.Frontiers in cell and developmental biology · 2020
    Review
  17. Review
  18. Review
  19. Review
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jean-Claude FarréDivision of Biological Sciences, University of California, San Diego, CA 92093-0322, USA.
Roswitha Krick
Suresh Subramani
Michael Thumm
University of Göttingen · DEUniversity of California, San Diego · US

Funding

Mechanisms Involved in PexophagyR01GM069373 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SUBRAMANI, SURESH · 2006 to 2013
$2.3M
NIGMS NIH HHS GM069373NIGMS NIH HHS R01 GM069373
6 · The paper itself

Abstract

Efficient detection and removal of superfluous or damaged organelles are crucial to maintain cellular homeostasis and to assure cell survival. Growing evidence shows that organelles or parts of them can be removed by selective subtypes of otherwise unselective macroautophagy and microautophagy. This requires both the adaptation of the core autophagic machinery and sophisticated mechanisms to recognize organelles destined for turnover. We review the current knowledge on autophagic removal of peroxisomes, mitochondria, ER and parts of the nucleus with an emphasis on yeasts as a model eukaryote.

Indexed as

AutophagyAutophagy-Related ProteinsCell NucleusFungiHomeostasisLipidsMembrane ProteinsMitochondriaModels, BiologicalOrganellesPhagosomesPhosphatidylinositol PhosphatesProtein KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsATG1 protein, S cerevisiaeATG9 protein, S cerevisiaeAutophagy-Related ProteinsLipidsMembrane Proteinsphosphatidylinositol 3-phosphatePhosphatidylinositol PhosphatesProtein KinasesSaccharomyces cerevisiae Proteins

Identifiers

PMID19515549
PMCPMC2725217
OpenAlexW2104362337

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.