Evidence map›Paper›PMID 19513789›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2009

Fine mapping of an epilepsy modifier gene on mouse Chromosome 19.

Sarah K Bergren, Elizabeth D Rutter, Jennifer A Kearney

Open access · greenAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Article
  3. DecipheringArXiv · 2024
    Article
  4. A versatile functional interaction between electrically silent KCellular and molecular life sciences : CMLS · 2024
    Article
  5. Strain-dependent effects on neurobehavioral and seizure phenotypes inbioRxiv : the preprint server for biology · 2023
    Article
  6. Review
  7. Gabra2 is a genetic modifier of Dravet syndrome in mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Article
  8. Review
  9. Article
  10. Noncanonical Ion Channel Behaviour in Pain.International journal of molecular sciences · 2019
    Review
  11. Kv5, Kv6, Kv8, and Kv9 subunits: No simple silent bystanders.The Journal of general physiology · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Gain-of-function mutation in Gnao1: a murine model of epileptiform encephalopathy (EIEE17)?Mammalian genome : official journal of the International Mammalian Genome Society · 2014
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Epilepsy as a neurodevelopmental disorder.Frontiers in psychiatry · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Sarah K BergrenDepartment of Human Genetics, University of Michigan, Ann Arbor, MI 48109, USA.
Elizabeth D Rutter
Jennifer A Kearney
Columbia University Irving Medical Center · USUniversity of Michigan–Ann Arbor · USVanderbilt University Medical Center · US

Funding

Combined Approach to the Genetic Basis of EpilepsyR01NS053792 · NINDS · VANDERBILT UNIVERSITY · PI KEARNEY, JENNIFER A · 2006 to 2019
$4.7M
NINDS NIH HHS NS053792NINDS NIH HHS R01 NS053792
6 · The paper itself

Abstract

Mutations in voltage-gated sodium channels are associated with several types of human epilepsy. Variable expressivity and penetrance are common features of inherited epilepsy caused by sodium channel mutations, suggesting that genetic modifiers may influence clinical severity. The mouse model Scn2a(Q54) has an epilepsy phenotype due to a mutation in Scn2a that results in elevated persistent sodium current. Phenotype severity in Scn2a(Q54) mice is dependent on the genetic background. Congenic C57BL/6J.Q54 mice have delayed onset and low seizure frequency compared to (C57BL/6J x SJL/J)F1.Q54 mice. Previously, we identified two modifier loci that influence the Scn2a(Q54) epilepsy phenotype: Moe1 (modifier of epilepsy 1) on Chromosome 11 and Moe2 on Chromosome 19. We have constructed interval-specific congenic strains to further refine the position of Moe2 on Chromosome 19 to a 5-Mb region. Sequencing and expression analyses of genes in the critical interval suggested two potential modifier candidates: (1) voltage-gated potassium channel subunit subfamily V, member 2 (Kcnv2), and (2) SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 2 (Smarca2). Based on its biological role in regulating membrane excitability and the association between ion channel variants and seizures, Kcnv2 is a strong functional candidate for Moe2. Modifier genes affecting the epilepsy phenotype of Scn2a(Q54) mice may contribute to variable expressivity and penetrance in human epilepsy patients with sodium channel mutations.

Indexed as

Amino Acid SequenceAnimalsChromosome MappingChromosomes, MammalianEpilepsyFemaleHumansMaleMiceMice, Inbred StrainsMice, TransgenicMolecular Sequence DataPotassium Channels, Voltage-GatedSequence AlignmentTranscription FactorsKcnv2 protein, mousePotassium Channels, Voltage-GatedSmarca2 protein, mouseTranscription Factors

Identifiers

PMID19513789
PMCPMC2804848
OpenAlexW2036941414

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.