Evidence map›Paper›PMID 19509288›Full record

ArticleThe Journal of biological chemistry2009

Human mitochondrial SUV3 and polynucleotide phosphorylase form a 330-kDa heteropentamer to cooperatively degrade double-stranded RNA with a 3'-to-5' directionality.

Dennis Ding-Hwa Wang, Zhanyong Shu, Scot A Lieser, Phang-Lang Chen, Wen-Hwa Lee

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 101 citations in OpenAlex.

  1. Biallelic variants inResearch square · 2026
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  10. Mechanisms underlining R-loop biology and implications for human disease.Frontiers in cell and developmental biology · 2025
    Review
  11. Mitochondrial RNA in Inflammation.International journal of biological sciences · 2025
    Review
  12. Article
  13. Article
  14. [SUV3 knockdown inhibits proliferation, migration, and invasion of hepatocellular carcinoma cells and induces PD-L1 expression].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2024
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Dennis Ding-Hwa WangDepartment of Biological Chemistry, University of California, Irvine, California 92697, USA. whlee@uci.edu
Zhanyong Shu
Scot A Lieser
Phang-Lang Chen
Wen-Hwa Lee
University of California, Irvine · US

Funding

Mitochondrial Roles of the SUV3 in Premature Aging and CancerR01AG027877 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI LEE, WEN-HWA · 2008 to 2012
$1.5M
Translational Research in Cancer Genomic MedicineT32CA113265 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LEE, WEN-HWA · 2007 to 2011
$1.4M
BLRD VA IK2 BX006111NCI NIH HHS T32 CA113265NCI NIH HHS T32 (CA-113265NIA NIH HHS AG027877NIA NIH HHS R01 AG027877
6 · The paper itself

Abstract

Efficient turnover of unnecessary and misfolded RNAs is critical for maintaining the integrity and function of the mitochondria. The mitochondrial RNA degradosome of budding yeast (mtEXO) has been recently studied and characterized; yet no RNA degradation machinery has been identified in the mammalian mitochondria. In this communication, we demonstrated that purified human SUV3 (suppressor of Var1 3) dimer and polynucleotide phosphorylase (PNPase) trimer form a 330-kDa heteropentamer that is capable of efficiently degrading double-stranded RNA (dsRNA) substrates in the presence of ATP, a task the individual components cannot perform separately. The configuration of this complex is similar to that of the core complex of the E. coli RNA degradosome lacking RNase E but very different from that of the yeast mtEXO. The hSUV3-hPNPase complex prefers substrates containing a 3' overhang and degrades the RNA in a 3'-to-5' directionality. Deleting a short stretch of amino acids (positions 510-514) compromises the ability of hSUV3 to form a stable complex with hPNPase to degrade dsRNA substrates but does not affect its helicase activity. Furthermore, two additional hSUV3 mutants with abolished helicase activity because of disrupted ATPase or RNA binding activities were able to bind hPNPase. However, the resulting complexes failed to degrade dsRNA, suggesting that an intact helicase activity is essential for the complex to serve as an effective RNA degradosome. Taken together, these results strongly suggest that the complex of hSUV3-hPNPase is an integral entity for efficient degradation of structured RNA and may be the long sought RNA-degrading complex in the mammalian mitochondria.

Indexed as

Protein MultimerizationAdenosine TriphosphateAmino Acid SubstitutionDEAD-box RNA HelicasesExoribonucleasesHumansMitochondriaMitochondrial ProteinsModels, BiologicalMolecular WeightMutant ProteinsProtein BindingRNA, Double-StrandedAdenosine TriphosphateDEAD-box RNA HelicasesExoribonucleasesMitochondrial ProteinsMutant ProteinsPNPT1 protein, humanRNA, Double-StrandedSUPV3L1 protein, human

Identifiers

PMID19509288
PMCPMC2742846
OpenAlexW2031665897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.