Evidence map›Paper›PMID 19506309›Full record

ArticleGenetics2009

Species-wide genetic variation and demographic history of Drosophila sechellia, a species lacking population structure.

Delphine Legrand, Maud I Tenaillon, Pat Matyot, Justin Gerlach, Daniel Lachaise, Marie-Louise Cariou

Abstract read
In one paragraph

Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
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  8. Satyrization in Drosophila fruitflies.Journal of evolutionary biology · 2021
    Article
  9. Moderate Population Structure inZoological studies · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Evolutionary Transitions of MicroRNA-Target Pairs.Genome biology and evolution · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. A selective sweep across species boundaries in Drosophila.Molecular biology and evolution · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Delphine LegrandLaboratoire Evolution, Génomes et Spéciation-UPR9034, Centre National de la Recherche Scientifique (CNRS), 91198 Gif-sur-Yvette Cedex and Université Paris-Sud 11, 91405 Orsay, France.
Maud I Tenaillon
Pat Matyot
Justin Gerlach
Daniel Lachaise
Marie-Louise Cariou

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long-term persistence of species characterized by a reduced effective population size is still a matter of debate that would benefit from the description of new relevant biological models. The island endemic specialist Drosophila sechellia has received considerable attention in evolutionary genetic studies. On the basis of the analysis of a limited number of strains, a handful of studies have reported a strikingly depleted level of genetic variation but little is known about its demographic history. We extended analyses of nucleotide polymorphism in D. sechellia to a species-wide level using 10 nuclear genes sequenced in 10 populations. We confirmed that D. sechellia exhibits little nucleotide-sequence variation. It is characterized by a low effective population size, >10-fold lower than that of D. simulans, which ranks D. sechellia as the least genetically diverse Drosophila species. No obvious population subdivision was detected despite its fragmented geographic distribution on different islands. We used approximate Bayesian computation (ABC) to test for demographic scenarios compatible with the geological history of the Seychelles and the ecology of D. sechellia. We found that while bottlenecks cannot account for the pattern of molecular evolution observed in this species, scenarios close to the null hypothesis of a constant population size are well supported. We discuss these findings with regard to adaptive features specific to D. sechellia and its life-history strategy.

Indexed as

Genetics, PopulationGenetic VariationModels, GeneticAnimalsBase SequenceBayes TheoremDrosophilaEvolution, MolecularMolecular Sequence DataPolymorphism, Single NucleotideSpecies Specificity

Identifiers

PMID19506309
PMCPMC2728859

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.