Evidence map›Paper›PMID 19506040›Full record

ArticleThe Journal of cell biology2009

Regulators of yeast endocytosis identified by systematic quantitative analysis.

Helen E Burston, Lymarie Maldonado-Báez, Michael Davey, Benjamen Montpetit, Cayetana Schluter, Beverly Wendland, Elizabeth Conibear

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 128 citations in OpenAlex.

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  20. The Role of Secretory Pathways inJournal of fungi (Basel, Switzerland) · 2020
    Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Helen E BurstonCentre for Molecular Medicine and Therapeutics, Child and Family Research Institute, University of British Columbia, Vancouver V5Z 4H4, British Columbia, Canada.
Lymarie Maldonado-Báez
Michael Davey
Benjamen Montpetit
Cayetana Schluter
Beverly Wendland
Elizabeth Conibear
Child and Family Research Institute · CAJohns Hopkins University · USUniversity of British Columbia · CA

Funding

MOLECULAR ANALYSIS OF ENDOCYTOSIS PROTEINS IN YEASTR01GM060979 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI WENDLAND, BEVERLY R · 2000 to 2013
$4.3M
ZEISS/31 STALLION DDI MULTI-DIMENSIONAL LIVE-CELL IMAGING WORKSTATIONS10RR022588 · NCRR · JOHNS HOPKINS UNIVERSITY · PI MCCAFFERY, J. MICHAEL · 2006 to 2006
$304k
NCRR NIH HHS 1S10RR022588-01NCRR NIH HHS S10 RR022588NIGMS NIH HHS R01 GM060979NIGMS NIH HHS R01 GM-60979
6 · The paper itself

Abstract

Endocytosis of receptors at the plasma membrane is controlled by a complex mechanism that includes clathrin, adaptors, and actin regulators. Many of these proteins are conserved in yeast yet lack observable mutant phenotypes, which suggests that yeast endocytosis may be subject to different regulatory mechanisms. Here, we have systematically defined genes required for internalization using a quantitative genome-wide screen that monitors localization of the yeast vesicle-associated membrane protein (VAMP)/synaptobrevin homologue Snc1. Genetic interaction mapping was used to place these genes into functional modules containing known and novel endocytic regulators, and cargo selectivity was evaluated by an array-based comparative analysis. We demonstrate that clathrin and the yeast AP180 clathrin adaptor proteins have a cargo-specific role in Snc1 internalization. We additionally identify low dye binding 17 (LDB17) as a novel conserved component of the endocytic machinery. Ldb17 is recruited to cortical actin patches before actin polymerization and regulates normal coat dynamics and actin assembly. Our findings highlight the conserved machinery and reveal novel mechanisms that underlie endocytic internalization.

Indexed as

ActinsAnimalsCell MembraneClathrinEndocytosisGene Expression ProfilingMicroarray AnalysisMicrofilament ProteinsMonomeric Clathrin Assembly ProteinsMultigene FamilyRecombinant Fusion ProteinsR-SNARE ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsABP1 protein, S cerevisiaeActinsClathrinclathrin assembly protein AP180Ldb17 protein, S cerevisiaeMicrofilament ProteinsMonomeric Clathrin Assembly ProteinsRecombinant Fusion ProteinsR-SNARE ProteinsSaccharomyces cerevisiae ProteinsSNC1 protein, S cerevisiae

Identifiers

PMID19506040
PMCPMC2711619
OpenAlexW1968131856

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.