Evidence map›Paper›PMID 19505845›Full record

ArticleJournal of clinical virology : the official publication of the Pan American Society for Clinical Virology2009

Detection of human herpesvirus-6 variants in pediatric brain tumors: association of viral antigen in low grade gliomas.

John R Crawford, Maria R Santi, Halldora K Thorarinsdottir, Robert Cornelison, Elisabeth J Rushing, Huizhen Zhang, Karen Yao, Steven Jacobson, Tobey J Macdonald

Abstract read
In one paragraph

Article in Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. The role of the RTEL1 rs2297440 polymorphism in the risk of glioma development: a meta-analysis.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

John R CrawfordThe Department of Neurology, Children's National Medical Center, The George Washington University, Washington, DC, United States. jrcrawford@ucsd.edu
Maria R Santi
Halldora K Thorarinsdottir
Robert Cornelison
Elisabeth J Rushing
Huizhen Zhang
Karen Yao
Steven Jacobson
Tobey J Macdonald
Children's National · USNational Institute of Neurological Disorders and Stroke · USArmed Forces Institute of Pathology · USGeorge Washington University · USNational Cancer Institute · US

Funding

Involvement Of Human Viruses Associated With Chronic Neurologic DiseaseZIANS002817 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI JACOBSON, STEVEN · 2009 to 2025
$26.5M
Translational studies of human viruses and chronic neurologic diseaseZIANS003040 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI JACOBSON, STEVEN · 2009 to 2025
$10.1M
Children's National Medical Center Application for NEXTU10NS077368 · NINDS · CHILDREN'S RESEARCH INSTITUTE · PI PACKER, ROGER · 2011 to 2017
$2.1M
Neurological Sciences Academic Development at CNMC.K12NS052159 · NINDS · CHILDREN'S RESEARCH INSTITUTE · PI PACKER, ROGER · 2006 to 2016
$1.2M
NINDS NIH HHS K12 NS052159NINDS NIH HHS U10 NS077368
6 · The paper itself

Abstract

backgroundHuman herpesvirus-6 (HHV-6) has been associated with a diverse spectrum of central nervous system (CNS) diseases and reported glial tropism.

objectiveTo determine if HHV-6 is present in a series of pediatric brain tumors. STUDY

designPediatric gliomas from 88 untreated patients represented in a tissue microarray (TMA) were screened for HHV-6 by nested polymerase chain reaction (PCR), in situ hybridization (ISH), and immunohistochemistry (IHC) and compared to non-glial tumors (N=22) and control brain (N=32). Results were correlated with tumor grade and overall survival.

resultsHHV-6 U57 was detected by nested PCR in 68/120 (57%) tumors and 7/32 (22%) age-matched non-tumor brain (P=0.001). HHV-6 U31 was positive in 73/120 (61%) tumors and 11/32 (34%) controls (P=0.019). Seventy-two percent (43/60) of tumors were HHV-6 Variant A. HHV-6 U57 was confirmed by ISH in 83/150 (54%) tumors and 10/32 (31%) controls (P=0.021), revealing a non-lymphocytic origin of HHV-6. HHV-6A/B gp116/64/54 late antigen was detected by IHC in 50/124 (40%) tumors and 6/32 (18%) controls (P=0.013). Interestingly, 58% of low grade gliomas (N=67) were IHC positive compared to 19% of high grade gliomas (N=21, P=0.002) and 25% of non-gliomas (N=36, P=0.001). HHV-6A/B gp116/64/54 antigen co-localized with glial fibrillary acidic protein, confirming the astrocytic origin of antigen. Overall, there was no primary association between HHV-6A/B gp116/64/54 antigen detection and survival (P=0.861).

conclusionsWe provide the first reported series of HHV-6 detection in pediatric brain tumors. The predominance of HHV-6 in glial tumors warrants further investigation into potential neurooncologic disease mechanisms.

Indexed as

AdolescentAntigens, ViralBrain NeoplasmsChildChild, PreschoolDNA, ViralGliomaHerpesvirus 6, HumanHumansImmunohistochemistryInfantIn Situ HybridizationPolymerase Chain ReactionRoseolovirus InfectionsSeverity of Illness IndexSurvival AnalysisAntigens, ViralDNA, Viral

Identifiers

PMID19505845
PMCPMC2749001
OpenAlexW2121633723

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.