Evidence map›Paper›PMID 19504579›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2009

A flow cytometric assay for the study of E3 ubiquitin ligase activity.

Joshua G Hilliard, Anne L Cooper, Joyce G Slusser, David J Davido

Open access · bronzeAbstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Joshua G HilliardDepartment of Molecular Biosciences, University of Kansas, Lawrence, USA.
Anne L Cooper
Joyce G Slusser
David J Davido
University of Kansas · USUniversity of Kansas Medical Center · US

Funding

Viral and host responses to HSV infectionR01AI072357 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI DAVIDO, DAVID J · 2007 to 2010
$1.3M
DETERMINISTIC LIGHT CONTROL IN SCINTILLATION CAMERASR41RR012263 · NCRR · SMV AMERICA · PI CLINTHORNE, NEAL H · 1997 to 1997
–
NCRR NIH HHS P20 RR012263NIAID NIH HHS R01 AI072357NIAID NIH HHS R01AI72357
6 · The paper itself

Abstract

Current methods for monitoring E3 ubiquitin ligase activity in cell culture or in vivo are limited. As a result, the degradation of cellular targets by many E3 ubiquitin ligases in live cells has not yet been examined. For this study, a target of an E3 ubiquitin ligase was expressed as a fluorescently labeled protein in cell culture. If the E3 ubiquitin ligase mediates the degradation of a target protein in cell culture, it is expected that the target will show a reduced fluorescence signal by FCM analysis. We initially used the E3 ubiquitin ligase, herpes simplex virus type 1 (HSV-1) infected cell protein 0 (ICP0) and one of its targets, promyelocytic leukemia (PML) protein, to determine the feasibility of our approach. Cells expressing a PML-GFP fusion protein were selected by cell sorting and infected with an adenoviral vector expressing ICP0. In contrast to mock-infected cells, only PML-GFP-expressing cells infected with the ICP0 adenoviral vector led to a significant decrease in the fluorescence signal of PML-GFP when examined by fluorescence microscopy and FCM analysis. Our results suggest that it is possible to examine the live activity of an E3 ubiquitin ligase (via one of its targets) in cell culture by FCM analysis.

Indexed as

Cell LineFlow CytometryGenetic VectorsGreen Fluorescent ProteinsHumansImmediate-Early ProteinsNuclear ProteinsPromyelocytic Leukemia ProteinRecombinant Fusion ProteinsTranscription FactorsTumor Suppressor ProteinsUbiquitin-Protein LigasesGreen Fluorescent ProteinsImmediate-Early ProteinsNuclear ProteinsPML protein, humanPromyelocytic Leukemia ProteinRecombinant Fusion ProteinsTranscription FactorsTumor Suppressor ProteinsUbiquitin-Protein LigasesVmw110 protein, Human herpesvirus 1

Identifiers

PMID19504579
PMCPMC2750075
OpenAlexW2083057948

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.