Evidence map›Paper›PMID 19502450›Full record

ArticleApplied and environmental microbiology2009

Involvement of cell surface structures in size-independent grazing resistance of freshwater Actinobacteria.

Mitsunori Tarao, Jan Jezbera, Martin W Hahn

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 98 citations in OpenAlex.

  1. A guide to the natural history of freshwater lake bacteria.Microbiology and molecular biology reviews : MMBR · 2011
    Pooled it
  2. Article
  3. Article
  4. Genome editing in ubiquitous freshwater Actinobacteria.Applied and environmental microbiology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Phosphonate production by marine microbes: Exploring new sources and potential function.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  14. Article
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  16. Article
  17. Article
  18. Some Mixotrophic Flagellate Species Selectively Graze on Archaea.Applied and environmental microbiology · 2017
    Article
  19. The S-Layer Protein of the Anammox BacteriumFrontiers in microbiology · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 3 countries.

Mitsunori TaraoInstitute for Limnology, Austrian Academy of Sciences, Mondseestrasse 9, A-5310 Mondsee, Austria. tarao@cc.tuat.ac.jp
Jan Jezbera
Martin W Hahn
Austrian Academy of Sciences · ATInstitute of Hydrobiology, Biology Centre, Academy of Sciences of the Czech Republic · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We compared the influences of grazing by the bacterivorous nanoflagellate Poterioochromonas sp. strain DS on ultramicrobacterial Actinobacteria affiliated with the Luna-2 cluster and ultramicrobacterial Betaproteobacteria of the species Polynucleobacter cosmopolitanus. These bacteria were almost identical in size (<0.1 microm(3)) and shape. Predation on a Polynucleobacter strain resulted in a reduction of >86% relative to the initial bacterial cell numbers within 20 days, while in comparable predation experiments with nine actinobacterial strains, no significant decrease of cell numbers by predation was observed over the period of >or=39 days. The differences in predation mortality between the actinobacterial strains and the Polynucleobacter strain clearly demonstrated size-independent grazing resistance for the investigated Actinobacteria. Importantly, this size-independent grazing resistance is shared by all nine investigated Luna-2 strains and thus represents a group-specific trait. We investigated if an S-layer, previously observed in an ultrastructure study, was responsible for the grazing resistance of these strains. Experiments aiming for removal of the S-layer or modification of cell surface proteins of one of the grazing-resistant strains by treatment with lithium chloride, EDTA, or formaldehyde resulted in 4.2- to 5.2-fold higher grazing rates in comparison to the levels for untreated cells. These results indicate the protective role of a proteinaceous cell surface structure in the size-independent grazing resistance of the actinobacterial Luna-2 strains, which can be regarded as a group-specific trait.

Indexed as

Predatory BehaviorActinobacteriaAnimalsBurkholderiaceaeColony Count, MicrobialDNA, BacterialDNA, ProtozoanDNA, RibosomalEukaryotaFresh WaterMembrane GlycoproteinsMolecular Sequence DataRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialDNA, ProtozoanDNA, RibosomalMembrane GlycoproteinsRNA, Ribosomal, 16SS-layer proteins

Identifiers

PMID19502450
PMCPMC2708440
OpenAlexW2107633933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.