Evidence map›Paper›PMID 19502044›Full record

ArticleRespiratory medicine2009

Role of genetic susceptibility to latent adenoviral infection and decreased lung function.

Ikuma Kasuga, James C Hogg, Peter D Paré, Shizu Hayashi, Edward G Sedgwick, Jian Ruan, Alison M Wallace, Jian-Qing He, Xiaozhu Zhang, Andrew J Sandford

Abstract read
In one paragraph

Article in Respiratory medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Trial
  2. Article
  3. Respiratory viral infection: a potential "missing link" in the pathogenesis of COPD.European respiratory review : an official journal of the European Respiratory Society · 2019
    Review
  4. Article
  5. Updates on the COPD gene list.International journal of chronic obstructive pulmonary disease · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ikuma KasugaThe James Hogg iCAPTURE Centre, University of British Columbia, St Paul's Hospital, Vancouver, Canada.
James C Hogg
Peter D Paré
Shizu Hayashi
Edward G Sedgwick
Jian Ruan
Alison M Wallace
Jian-Qing He
Xiaozhu Zhang
Andrew J Sandford
University of British Columbia · CASt. Paul's Hospital · CA

Funding

ADENOVIRAL INFECTION IN THE PATHOGENESIS OF EMPHYSEMAR01HL066569 · NHLBI · UNIVERSITY OF BRITISH COLUMBIA · PI HOGG, JAMES C · 2000 to 2003
$900k
NHLBI NIH HHS 1R01HL066569-01NHLBI NIH HHS R01 HL066569
6 · The paper itself

Abstract

backgroundLatent adenoviral infection may amplify cigarette smoke-induced lung inflammation and therefore play an important role in the development of chronic obstructive pulmonary disease (COPD). Adenoviruses can evade the human immune response via their 19-kDa protein (19K) which delays the expression of class I human leukocyte antigen (HLA) proteins. The 19K protein shows higher affinity to HLA-B7 and A2 compared with HLA-A1 and A3. The receptor for adenovirus (CXADR) and integrin beta(5) (ITGB5) are host factors which might affect adenovirus infection. Therefore, we investigated the contribution of HLA, CXADR, and ITGB5 genetic variants to the presence of the E1A gene and to level of lung function.

methodsStudy subjects were assayed for HLA-B7, A1, A2 and A3 by PCR-based assays using allele-specific primers. Polymorphisms of the CXADR and ITGB5 genes were genotyped by PCR-based restriction fragment length polymorphism assays. Detection of adenoviral E1A gene was performed by a real-time PCR TaqMan assay.

resultsE1A positive individuals had a lower FEV(1) compared with E1A negative individuals. However, there was no significant difference in E1A positivity rate between the high (HLA-B7 and A2) and low (HLA-A1 and A3) 19K affinity groups. There was also no significant difference in FEV(1) level between each affinity group. There was no significant difference in E1A positivity rate or lung function among the CXADR and ITGB5 genotypes.

conclusionsGenetic variants in HLA, CXADR and ITGB5 do not influence latent adenoviral infections and are not associated with COPD.

Indexed as

Adenovirus Infections, HumanAdultAgedAged, 80 and overCoxsackie and Adenovirus Receptor-Like Membrane ProteinFemaleForced Expiratory VolumeGene FrequencyGenetic Predisposition to DiseaseGenotypeHLA AntigensHumansIntegrin beta ChainsMaleMiddle AgedPulmonary Disease, Chronic ObstructiveCLMP protein, humanCoxsackie and Adenovirus Receptor-Like Membrane ProteinHLA Antigensintegrin beta5Integrin beta ChainsReceptors, Virus

Identifiers

PMID19502044
PMCPMC2757510
OpenAlexW2109617382

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.