Evidence map›Paper›PMID 19500621›Full record

ArticleJournal of biotechnology2009

Fluorescence complementation via EF-hand interactions.

Ning Chen, Yiming Ye, Jin Zou, Shunyi Li, Siming Wang, Amy Martin, Robert Wohlhueter, Jenny J Yang

Open access · greenAbstract read
In one paragraph

Article in Journal of biotechnology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Designing caspase-3 sensors for imaging of apoptosis in living cells.Chemistry (Weinheim an der Bergstrasse, Germany) · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ning ChenDepartment of Chemistry, Center for Drug Design and Advanced Biotechnology, Georgia State University, Atlanta, GA 30302, USA.
Yiming Ye
Jin Zou
Shunyi Li
Siming Wang
Amy Martin
Robert Wohlhueter
Jenny J Yang
Georgia State University · USCenters for Disease Control and Prevention · US

Funding

Rational Design and Analysis of Calcium Binding ProteinR01GM062999 · NIGMS · GEORGIA STATE UNIVERSITY · PI YANG, JENNY J · 2001 to 2005
$991k
Design of Ca2+ Sensors to Monitor Ca2+ Signaling in ERR21GM070555 · NIGMS · GEORGIA STATE UNIVERSITY · PI YANG, JENNY J · 2004 to 2005
$391k
NIGMS NIH HHS GM 62999-1NIGMS NIH HHS GM-70555NIGMS NIH HHS R01 GM062999NIGMS NIH HHS R21 GM070555
6 · The paper itself

Abstract

Fluorescence complementation technology with fluorescent proteins is a powerful approach to investigate molecular recognition by monitoring fluorescence enhancement when non-fluorescent fragments of fluorescent proteins are fused with target proteins, resulting in a new fluorescent complex. Extension of the technology to calcium-dependent protein-protein interactions has, however, rarely been reported. Here, a linker containing trypsin cleavage sites was grafted onto enhanced green fluorescent protein (EGFP). Under physiological conditions, a modified fluorescent protein, EGFP-T1, was cleaved into two major fragments which continue to interact with each other, exhibiting strong optical and fluorescence signals. The larger fragment, comprised of amino acids 1-172, including the chromophore, retains only weak fluorescence. Strong green fluorescence was observed when plasmid DNA encoding complementary EGFP fragments fused to the EF-hand motifs of calbindin D9k (EF1 and EF2) were co-transfected into HeLa cells, suggesting that chromophore maturation and fluorescence complementation from EGFP fragments can be accomplished intracellularly by reassembly of EF-hand motifs, which have a strong tendency for dimerization. Moreover, an intracellular calcium increase upon addition of a calcium ionophore, ionomycin in living cells, results in an increase of fluorescence signal. This novel application of calcium-dependent fluorescence complementation has the potential to monitor protein-protein interactions triggered by calcium signalling pathways in living cells.

Indexed as

EF Hand MotifsAmino Acid SequenceCalcium SignalingCloning, MolecularGreen Fluorescent ProteinsHeLa CellsHumansKineticsMicroscopy, FluorescenceModels, MolecularMolecular Sequence DataPeptide FragmentsProtein Interaction Domains and MotifsRecombinant Fusion ProteinsTrypsinenhanced green fluorescent proteinGreen Fluorescent ProteinsPeptide FragmentsRecombinant Fusion ProteinsTrypsin

Identifiers

PMID19500621
PMCPMC2866105
OpenAlexW2077005555

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.