Evidence map›Paper›PMID 19500594›Full record

ArticleJournal of molecular biology2009

Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators.

Rachel Anne Mooney, Kristian Schweimer, Paul Rösch, Max Gottesman, Robert Landick

Abstract read
In one paragraph

Article in Journal of molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 191 citations in OpenAlex.

  1. Article
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  4. mBio · 2025
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  14. Life (Basel, Switzerland) · 2022
    Review
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64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Rachel Anne MooneyDepartment of Biochemistry, University of Wisconsin, Madison, WI 53706, USA.
Kristian Schweimer
Paul Rösch
Max Gottesman
Robert Landick
University of Bayreuth · DEUniversity of Wisconsin–Madison · USColumbia University Irving Medical Center · US

Funding

STRUCTURE/FUNCTION OF TRANSCRIPTION COMPLEX RNA HAIRPINSR01GM038660 · NIGMS · WASHINGTON UNIVERSITY · PI Robert Landick · 1992 to 2026
$12.2M
CONTROL OF TRANSCRIPTION TERMINATION IN E. COLIR01GM037219 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GOTTESMAN, MAX ELLIOT · 1986 to 2017
$6.6M
Structure/Function of Transcription Complex RNA HairpinsR37GM038660 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI LANDICK, ROBERT · 2001 to 2010
$5.5M
Control of Transcription Termination in E. coliR56GM037219 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GOTTESMAN, MAX ELLIOT · 2009 to 2009
$399k
STRUCTURE/FUNCTION OF TRANSCRIPTION COMPLEX RNA HAIRPINSR29GM038660 · NIGMS · WASHINGTON UNIVERSITY · PI LANDICK, ROBERT · 1987 to 1991
–
NIGMS NIH HHS GM037219NIGMS NIH HHS GM38660NIGMS NIH HHS R01 GM037219NIGMS NIH HHS R01 GM038660NIGMS NIH HHS R37 GM038660NIGMS NIH HHS R56 GM037219
6 · The paper itself

Abstract

NusG is a conserved regulatory protein that interacts with elongation complexes (ECs) of RNA polymerase, DNA, and RNA to modulate transcription in multiple and sometimes opposite ways. In Escherichia coli, NusG suppresses pausing and increases elongation rate, enhances termination by E. coli rho and phage HK022 Nun protein, and promotes antitermination by lambdaN and in ribosomal RNA operons. We report NMR studies that suggest that E. coli NusG consists of two largely independent N- and C-terminal structural domains, NTD and CTD, respectively. Based on tests of the functions of the NTD and CTD and variants of NusG in vivo and in vitro, we find that NTD alone is sufficient to suppress pausing and enhance transcript elongation in vitro. However, neither domain alone can enhance rho-dependent termination or support antitermination, indicating that interactions of both domains with ECs are required for these processes. We propose that the two domains of NusG mediate distinct interactions with ECs: the NTD interacts with RNA polymerase and the CTD interacts with rho and other regulators, providing NusG with different combinations of interactions to effect different regulatory outcomes.

Indexed as

Transcription, GeneticDNA-Directed RNA PolymerasesEscherichia coliEscherichia coli ProteinsGenes, DominantGenes, LethalPeptide Elongation FactorsProtein ConformationProtein Structure, TertiaryRho FactorTerminator Regions, GeneticTranscription FactorsDNA-Directed RNA PolymerasesEscherichia coli ProteinsNusG protein, E coliPeptide Elongation FactorsRho FactorTranscription Factors

Identifiers

PMID19500594
PMCPMC2763281
OpenAlexW2115880738

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.