Evidence map›Paper›PMID 19500156›Full record

ArticleGenes, brain, and behavior2009

A major QTL for acute ethanol sensitivity in the alcohol tolerant and non-tolerant selected rat lines.

R A Radcliffe, V G Erwin, P Bludeau, X Deng, T Fay, K L Floyd, R A Deitrich

Open access · bronzeAbstract read
In one paragraph

Article in Genes, brain, and behavior, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Quantitative trait loci for sensitivity to ethanol intoxication in a C57BL/6J×129S1/SvImJ inbred mouse cross.Mammalian genome : official journal of the International Mammalian Genome Society · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

R A RadcliffeDepartment of Pharmaceutical Sciences, University of Colorado Denver, Aurora, CO 80045, USA. richard.radcliffe@ucdenver.edu
V G Erwin
P Bludeau
X Deng
T Fay
K L Floyd
R A Deitrich
University of Colorado Denver · USInstitute for Behavioral Medicine · USUniversity of Colorado Boulder · US

Funding

Gene Expression and Drug-Induced Sensitivity to AlcoholR01AA013177 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI RADCLIFFE, RICHARD A · 2002 to 2004
$915k
GENES FOR ETOH SENSITIVITY IN THE RAT--QTL ANALYSISR37AA010556 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI DEITRICH, RICHARD A · 1996 to 2003
$879k
GENETICS OF LOW DOSE ETHANOL EFFECTSR01AA012650 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI DEITRICH, RICHARD A · 2000 to 2004
$537k
INVOLVEMENT OF BRAIN PROTEINS IN ACUTE ETHANOL ACTIONSK05AA000093 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI DEITRICH, RICHARD A · 1986 to 2001
$208k
NIAAA NIH HHS K05 AA00093NIAAA NIH HHS R01 AA012650NIAAA NIH HHS R01 AA013177NIAAA NIH HHS R01 AA12650NIAAA NIH HHS R01 AA13177NIAAA NIH HHS R37 AA010556NIAAA NIH HHS R37 AA10556
6 · The paper itself

Abstract

The Alcohol Tolerant and Alcohol Non-Tolerant rats (AT, ANT) were selectively bred for ethanol-induced ataxia as measured on the inclined plane. Here we report on a quantitative trait locus (QTL) study in an F(2) intercross population derived from inbred AT and ANT (IAT, IANT) and a follow-up study of congenics that were bred to examine one of the mapped QTLs. Over 1200 F(2) offspring were tested for inclined plane sensitivity, acute tolerance on the inclined plane, duration of the loss of righting reflex (LORR) and blood ethanol at regain of the righting reflex (BECRR). F(2) rats that were in the upper and lower 20% for inclined plane sensitivity were genotyped with 78 SSLP markers. Significant QTLs for inclined plane sensitivity were mapped on chromosomes 8 and 20; suggestive QTLs were mapped on chromosomes 1, 2 and 3. Highly significant QTLs for LORR duration (LOD = 12.4) and BECRR (LOD = 5.7) were mapped to the same locus on chromosome 1. Breeding and testing of reciprocal congenic lines confirmed the chromosome 1 LORR/BECRR QTL. A series of recombinant congenic sub-lines were bred to fine-map this QTL. Current results have narrowed the QTL to an interval of between 5 and 20 Mb. We expect to be able to narrow the interval to less than 5 Mb with additional genotyping and continued breeding of recombinant sub-congenic lines.

Indexed as

Alcohol-Induced Disorders, Nervous SystemAlcohol-Related DisordersAnimalsAnimals, CongenicAtaxiaBrain ChemistryChromosome MappingDisease Models, AnimalDrug ToleranceFemaleGenetic MarkersGenetic Predisposition to DiseaseGenotypeMaleQuantitative Trait LociRatsGenetic Markers

Identifiers

PMID19500156
PMCPMC2880637
OpenAlexW2092406434

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.