Evidence map›Paper›PMID 19498036›Full record

ArticleHuman molecular genetics2009

Expansion of the Parkinson disease-associated SNCA-Rep1 allele upregulates human alpha-synuclein in transgenic mouse brain.

Kenneth D Cronin, Dongliang Ge, Paul Manninger, Colton Linnertz, Anna Rossoshek, Bonnie M Orrison, David J Bernard, Omar M A El-Agnaf, Michael G Schlossmacher, Robert L Nussbaum and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 109 citations in OpenAlex.

  1. Trial
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  19. Review
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Kenneth D CroninCenter for Human Genome Variation, Institute for Genome Sciences and Policy, Duke University, Durham, NC 27708, USA.
Dongliang Ge
Paul Manninger
Colton Linnertz
Anna Rossoshek
Bonnie M Orrison
David J Bernard
Omar M A El-Agnaf
Michael G Schlossmacher
Robert L Nussbaum
Ornit Chiba-Falek
National Human Genome Research Institute · USUniversity of Ottawa · CADuke Medical Center · USUnited Arab Emirates University · AEUniversity of California, San Francisco · US

Funding

The chemical genetics of PD: a high throughput drug screening programP50NS038375 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI STEIN, ROSS L · 1999 to 2009
$14.9M
NINDS NIH HHS 5P50-NS038375NINDS NIH HHS P50 NS038375
6 · The paper itself

Abstract

Alpha-synuclein (SNCA) gene has been implicated in the development of rare forms of familial Parkinson disease (PD). Recently, it was shown that an increase in SNCA copy numbers leads to elevated levels of wild-type SNCA-mRNA and protein and is sufficient to cause early-onset, familial PD. A critical question concerning the molecular pathogenesis of PD is what contributory role, if any, is played by the SNCA gene in sporadic PD. The expansion of SNCA-Rep1, an upstream, polymorphic microsatellite of the SNCA gene, is associated with elevated risk for sporadic PD. However, whether SNCA-Rep1 is the causal variant and the underlying mechanism with which its effect is mediated by remained elusive. We report here the effects of three distinct SNCA-Rep1 variants in the brains of 72 mice transgenic for the entire human SNCA locus. Human SNCA-mRNA and protein levels were increased 1.7- and 1.25-fold, respectively, in homozygotes for the expanded, PD risk-conferring allele compared with homozygotes for the shorter, protective allele. When adjusting for the total SNCA-protein concentration (endogenous mouse and transgenic human) expressed in each brain, the expanded risk allele contributed 2.6-fold more to the SNCA steady-state than the shorter allele. Furthermore, targeted deletion of Rep1 resulted in the lowest human SNCA-mRNA and protein concentrations in murine brain. In contrast, the Rep1 effect was not observed in blood lysates from the same mice. These results demonstrate that Rep1 regulates human SNCA expression by enhancing its transcription in the adult nervous system and suggest that homozygosity for the expanded Rep1 allele may mimic locus multiplication, thereby elevating PD risk.

Indexed as

Microsatellite RepeatsUp-RegulationAllelesalpha-SynucleinAnimalsBrainFemaleHumansMaleMiceMice, TransgenicParkinson DiseasePolymorphism, Geneticalpha-SynucleinSNCA protein, human

Identifiers

PMID19498036
PMCPMC2722989
OpenAlexW2166374868

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.