Evidence map›Paper›PMID 19497885›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Extreme inbreeding in Leishmania braziliensis.

Virginie Rougeron, Thierry De Meeûs, Mallorie Hide, Etienne Waleckx, Herman Bermudez, Jorge Arevalo, Alejandro Llanos-Cuentas, Jean-Claude Dujardin, Simone De Doncker, Dominique Le Ray and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Review
  2. Review
  3. BALB/c mice infection with hybridFrontiers in cellular and infection microbiology · 2025
    Article
  4. Article
  5. Insights into the Genetic Diversity ofPathogens (Basel, Switzerland) · 2023
    Article
  6. Subspecific Nomenclature ofPathogens (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Microorganisms · 2021
    Article
  11. Review
  12. Genes · 2021
    Article
  13. Article
  14. Ecological divergence and hybridization of NeotropicalProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Risk Factors ofThe American journal of tropical medicine and hygiene · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Genomic Diversification, Structural Plasticity, and Hybridization inFrontiers in cellular and infection microbiology · 2020
    Article
  20. Study on the Occurrence of Genetic Exchange Among Parasites of theFrontiers in cellular and infection microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Virginie RougeronGénétique et Evolution des Maladies Infectieuses, IRD/CNRS/UMI (UMR 2724), Montpellier, France. rougeron.virginie@gmail.com
Thierry De Meeûs
Mallorie Hide
Etienne Waleckx
Herman Bermudez
Jorge Arevalo
Alejandro Llanos-Cuentas
Jean-Claude Dujardin
Simone De Doncker
Dominique Le Ray
Francisco J Ayala
Anne-Laure Bañuls

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leishmania species of the subgenus Viannia and especially Leishmania braziliensis are responsible for a large proportion of New World leishmaniasis cases. The reproductive mode of Leishmania species has often been assumed to be predominantly clonal, but remains unsettled. We have investigated the genetic polymorphism at 12 microsatellite loci on 124 human strains of Leishmania braziliensis from 2 countries, Peru and Bolivia. There is substantial genetic diversity, with an average of 12.4 +/- 4.4 alleles per locus. There is linkage disequilibrium at a genome-wide scale, as well as a substantial heterozygote deficit (more than 50% the expected value from Hardy-Weinberg equilibrium), which indicates high levels of inbreeding. These observations are inconsistent with a strictly clonal model of reproduction, which implies excess heterozygosity. Moreover, there is large genetic heterogeneity between populations within countries (Wahlund effect), which evinces a strong population structure at a microgeographic scale. Our findings are compatible with the existence of population foci at a microgeographic scale, where clonality alternates with sexuality of an endogamic nature, with possible occasional recombination events between individuals of different genotypes. These findings provide key clues on the ecology and transmission patterns of Leishmania parasites.

Indexed as

AnimalsBoliviaHeterozygoteHumansLeishmania braziliensisLinkage DisequilibriumMicrosatellite RepeatsPeruPolymorphism, GeneticReproduction

Identifiers

PMID19497885
PMCPMC2700931

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.