Evidence map›Paper›PMID 19488044›Full record

ArticleMolecular psychiatry2009

Genome-wide association study of bipolar disorder in European American and African American individuals.

E N Smith, C S Bloss, J A Badner, T Barrett, P L Belmonte, W Berrettini, W Byerley, W Coryell, D Craig, H J Edenberg and 27 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular psychiatry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 212 papers, 17 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
212citing papers in PubMed, 17 pooled it
25.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

212 citing papers in PubMed, 17 syntheses or guidelines pooled it, 379 citations in OpenAlex.

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152 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors at 19 institutions in 1 country.

E N SmithScripps Genomic Medicine, Scripps Translational Science Institute, La Jolla, CA, USA.
C S Bloss
J A Badner
T Barrett
P L Belmonte
W Berrettini
W Byerley
W Coryell
D Craig
H J Edenberg
E Eskin
T Foroud
E Gershon
T A Greenwood
M Hipolito
D L Koller
W B Lawson
C Liu
F Lohoff
M G McInnis
F J McMahon
D B Mirel
S S Murray
C Nievergelt
J Nurnberger
E A Nwulia
J Paschall
J B Potash
J Rice
T G Schulze
W Scheftner
C Panganiban
N Zaitlen
P P Zandi
S Zöllner
N J Schork
J R Kelsoe
Indiana University School of MedicineScripps Research Institute · USHoward University · USJohns Hopkins University · USUniversity of California, San Diego · USUniversity of Chicago · USTranslational Genomics Research Institute · USUniversity of California, Los Angeles · USUniversity of Michigan–Ann Arbor · USUniversity of Pennsylvania · USMassachusetts Institute of Technology · USNational Center for Biotechnology Information · USNational Institute of Mental Health · USPortland VA Medical Center · USRush University · USUnited States Department of Health and Human Services · USUniversity of California, San Francisco · USUniversity of Iowa · USWashington University in St. Louis · US

Funding

SCRIPPS TRANSLATIONAL SCIENCE INSTITUTE (UL1)UL1RR025774 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2008 to 2011
$16.3M
Genomic Association Study of Bipolar DisorderR01MH078151 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KELSOE, JOHN R. · 2007 to 2009
$5.5M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059534 · NIMH · WASHINGTON UNIVERSITY · PI RICE, JOHN P. · 1998 to 2007
$3.1M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059545 · NIMH · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI NURNBERGER, JOHN I · 1998 to 2007
$2.6M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059533 · NIMH · JOHNS HOPKINS UNIVERSITY · PI MACKINNON, DEAN FREDERICK · 1998 to 2007
$2.4M
The Bipolar Genome StudyR01MH094483 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CRAIG, DAVID W, EDENBERG, HOWARD J · 2012 to 2014
$2.2M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH060068 · NIMH · UNIVERSITY OF CALIFORNIA IRVINE · PI BYERLEY, WILLIAM · 1998 to 2007
$2.1M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059553 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BERRETTINI, WADE H · 1998 to 2007
$2.1M
Mapping genes that contribute to bipolar disorderZ01MH002810 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MCMAHON, FRANCIS J · 2003 to 2008
$2.0M
Collaborative Genomic Study of Bipolar DisorderR01MH059548 · NIMH · UNIVERSITY OF IOWA · PI CORYELL, WILLIAM HENRY · 1998 to 2007
$1.9M
COLLABORATIVE STUDY OF BIPOLAR DISORDERR01MH059535 · NIMH · UNIVERSITY OF CHICAGO · PI GERSHON, ELLIOT S · 1998 to 2007
$1.9M
COLLABORATIVE GENOMIC STUDY OF BIPOLAR DISORDERR01MH059567 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KELSOE, JOHN R. · 1998 to 2007
$1.8M
Intramural NIH HHS Z01 MH002810NCRR NIH HHS 1U54RR025204-01NCRR NIH HHS UL1 RR025774NHLBI NIH HHS K25 HL080079NIMH NIH HHS 1Z01MH002810-01NIMH NIH HHS K01 MH072866NIMH NIH HHS K08 MH080372NIMH NIH HHS MH059567NIMH NIH HHS MH078151NIMH NIH HHS MH081804NIMH NIH HHS R01 MH059533NIMH NIH HHS R01 MH059534NIMH NIH HHS R01 MH059535NIMH NIH HHS R01 MH059545NIMH NIH HHS R01 MH059548NIMH NIH HHS R01 MH059553NIMH NIH HHS R01 MH059556NIMH NIH HHS R01 MH059567NIMH NIH HHS R01 MH060068NIMH NIH HHS R01 MH078151NIMH NIH HHS R01 MH081804NIMH NIH HHS R01 MH094483NIMH NIH HHS R01 MH59533NIMH NIH HHS R01 MH59535NIMH NIH HHS R01 MH59545NIMH NIH HHS R01 MH59553NIMH NIH HHS R01 MH59567NIMH NIH HHS R01 MH60068NIMH NIH HHS U01 MH046282NIMH NIH HHS U01 MH46274NIMH NIH HHS U01 MH46280NIMH NIH HHS U01 MH46282
6 · The paper itself

Abstract

To identify bipolar disorder (BD) genetic susceptibility factors, we conducted two genome-wide association (GWA) studies: one involving a sample of individuals of European ancestry (EA; n=1001 cases; n=1033 controls), and one involving a sample of individuals of African ancestry (AA; n=345 cases; n=670 controls). For the EA sample, single-nucleotide polymorphisms (SNPs) with the strongest statistical evidence for association included rs5907577 in an intergenic region at Xq27.1 (P=1.6 x 10(-6)) and rs10193871 in NAP5 at 2q21.2 (P=9.8 x 10(-6)). For the AA sample, SNPs with the strongest statistical evidence for association included rs2111504 in DPY19L3 at 19q13.11 (P=1.5 x 10(-6)) and rs2769605 in NTRK2 at 9q21.33 (P=4.5 x 10(-5)). We also investigated whether we could provide support for three regions previously associated with BD, and we showed that the ANK3 region replicates in our sample, along with some support for C15Orf53; other evidence implicates BD candidate genes such as SLITRK2. We also tested the hypothesis that BD susceptibility variants exhibit genetic background-dependent effects. SNPs with the strongest statistical evidence for genetic background effects included rs11208285 in ROR1 at 1p31.3 (P=1.4 x 10(-6)), rs4657247 in RGS5 at 1q23.3 (P=4.1 x 10(-6)), and rs7078071 in BTBD16 at 10q26.13 (P=4.5 x 10(-6)). This study is the first to conduct GWA of BD in individuals of AA and suggests that genetic variations that contribute to BD may vary as a function of ancestry.

Indexed as

Genome-Wide Association StudyAdolescentAdultBipolar DisorderBlack or African AmericanCase-Control StudiesCohort StudiesFemaleGenetic Predisposition to DiseaseGenome, HumanHaplotypesHumansMaleMiddle AgedPolymorphism, Single NucleotideReference Values

Identifiers

PMID19488044
PMCPMC3035981
OpenAlexW2136702573

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.