Evidence map›Paper›PMID 19480704›Full record

ArticleBMC genomics2009

Cytokine-dependent and-independent gene expression changes and cell cycle block revealed in Trypanosoma cruzi-infected host cells by comparative mRNA profiling.

Jaime A Costales, Johanna P Daily, Barbara A Burleigh

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Journal of medical microbiology · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Frontiers in cell and developmental biology · 2023
    Review
  9. Different Transcriptomic Response toFrontiers in cellular and infection microbiology · 2022
    Article
  10. Article
  11. Article
  12. Parasitology · 2021
    Article
  13. Transcriptional Studies onFrontiers in cellular and infection microbiology · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Frontiers in cellular and infection microbiology · 2020
    Article
  19. DNA lesions and repair in trypanosomatids infection.Genetics and molecular biology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jaime A CostalesDepartment of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, MA 02115, USA. jacostalesc@puce.edu.ec
Johanna P Daily
Barbara A Burleigh
Harvard University · US

Funding

Trypansoma cruzi-induced host cell signaling responsesR01AI047960 · NIAID · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI BURLEIGH, BARBARA A · 2000 to 2009
$2.8M
NIAID NIH HHS R01 AI047960
6 · The paper itself

Abstract

backgroundThe requirements for growth and survival of the intracellular pathogen Trypanosoma cruzi within mammalian host cells are poorly understood. Transcriptional profiling of the host cell response to infection serves as a rapid read-out for perturbation of host physiology that, in part, reflects adaptation to the infective process. Using Affymetrix oligonucleotide array analysis we identified common and disparate host cell responses triggered by T. cruzi infection of phenotypically diverse human cell types.

resultsWe report significant changes in transcript abundance in T. cruzi-infected fibroblasts, endothelial cells and smooth muscle cells (2852, 2155 and 531 genes respectively; fold-change > or = 2, p-value < 0.01) 24 hours post-invasion. A prominent type I interferon response was observed in each cell type, reflecting a secondary response to secreted cytokine in infected cultures. To identify a core cytokine-independent response in T. cruzi-infected fibroblasts and endothelial cells transwell plates were used to distinguish cytokine-dependent and -independent gene expression profiles. This approach revealed the induction of metabolic and signaling pathways involved in cell proliferation, amino acid catabolism and response to wounding as common themes in T. cruzi-infected cells. In addition, the downregulation of genes involved in mitotic cell cycle and cell division predicted that T. cruzi infection may impede host cell cycle progression. The observation of impaired cytokinesis in T. cruzi-infected cells, following nuclear replication, confirmed this prediction.

conclusionMetabolic pathways and cellular processes were identified as significantly altered at the transcriptional level in response to T. cruzi infection in a cytokine-independent manner. Several of these alterations are supported by previous studies of T. cruzi metabolic requirements or effects on the host. However, our methods also revealed a T. cruzi-dependent block in the host cell cycle, at the level of cytokinesis, previously unrecognized for this pathogen-host cell interaction.

Indexed as

Cell CycleGene Expression ProfilingAnimalsCell LineCell ProliferationChagas DiseaseCytokinesGene Expression RegulationHost-Pathogen InteractionsHumansOligonucleotide Array Sequence AnalysisRNA, MessengerTrypanosoma cruziCytokinesRNA, Messenger

Identifiers

PMID19480704
PMCPMC2709661
OpenAlexW2129145334

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.