Evidence map›Paper›PMID 19479055›Full record

ArticlePloS one2009

HIV-1 superinfection in the antiretroviral therapy era: are seroconcordant sexual partners at risk?

Mary S Campbell, Geoffrey S Gottlieb, Stephen E Hawes, David C Nickle, Kim G Wong, Wenjie Deng, Thomas M Lampinen, Nancy B Kiviat, James I Mullins

Abstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
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  7. Review
  8. Article
  9. Article
  10. Review
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  12. Article
  13. Frequency and implications of HIV superinfection.The Lancet. Infectious diseases · 2013
    Review
  14. Article
  15. Article
  16. Article
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  18. Review
  19. Estimating the potential pool of HIV-infected deceased organ donors in the United States.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2011
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mary S CampbellDepartment of Medicine, School of Medicine, University of Washington, Seattle, Washington, United States of America. msc6@u.washington.edu
Geoffrey S Gottlieb
Stephen E Hawes
David C Nickle
Kim G Wong
Wenjie Deng
Thomas M Lampinen
Nancy B Kiviat
James I Mullins

Funding

University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Kenneth Sherr · 1988 to 2026
$104.9M
Viral Determinants of HIV-1 Transmission in African HeterosexualsP01AI057005 · NIAID · UNIVERSITY OF WASHINGTON · PI COREY, LAWRENCE · 2003 to 2014
$20.5M
HOST DEFENSE TRAINING IN ALLERGY AND INFECTIOUS DISEASEST32AI007044 · NIAID · UNIVERSITY OF WASHINGTON · PI DAVID Neal FREDRICKS · 1985 to 2026
$14.6M
Occurrence and Outcome of Dual HIV-1 InfectionR37AI047734 · NIAID · UNIVERSITY OF WASHINGTON · PI MULLINS, JAMES IVAN · 2005 to 2014
$5.9M
Mucosal Transmission and Localized Superinfection in HIV-1K08AI074424 · NIAID · UNIVERSITY OF WASHINGTON · PI CAMPBELL, MARY S · 2007 to 2011
$603k
NATURAL HISTORY OF DYSPLASIA AND HIV INFECTIONR01CA055488 · NCI · UNIVERSITY OF WASHINGTON · PI KIVIAT, NANCY B. · 1992 to 2000
$595k
NCI NIH HHS R01 CA055488NCI NIH HHS R01CA055488NIAID NIH HHS K08 AI074424NIAID NIH HHS K08AI074424NIAID NIH HHS P01 AI057005NIAID NIH HHS P01AI57005NIAID NIH HHS P30 AI027757NIAID NIH HHS P30AI27757NIAID NIH HHS R37 AI047734NIAID NIH HHS R37AI047734NIAID NIH HHS T32 AI007044NIAID NIH HHS T32AI007044
6 · The paper itself

Abstract

backgroundAcquisition of more than one strain of human immunodeficiency virus type 1 (HIV-1) has been reported to occur both during and after primary infection, but the risks and repercussions of dual and superinfection are incompletely understood. In this study, we evaluated a longitudinal cohort of chronically HIV-infected men who were sexual partners to determine if individuals acquired their partners' viral strains. METHODOLOGY: Our cohort of HIV-positive men consisted of 8 couples that identified themselves as long-term sexual partners. Viral sequences were isolated from each subject and analyzed using phylogenetic methods. In addition, strain-specific PCR allowed us to search for partners' viruses present at low levels. Finally, we used computational algorithms to evaluate for recombination between partners' viral strains. PRINCIPAL FINDINGS/

conclusionsAll couples had at least one factor associated with increased risk for acquisition of new HIV strains during the study, including detectable plasma viral load, sexually transmitted infections, and unprotected sex. One subject was dually HIV-1 infected, but neither strain corresponded to that of his partner. Three couples' sequences formed monophyletic clusters at the entry visit, with phylogenetic analysis suggesting that one member of the couple had acquired an HIV strain from his identified partner or that both had acquired it from the same source outside their partnership. The 5 remaining couples initially displayed no evidence of dual infection, using phylogenetic analysis and strain-specific PCR. However, in 1 of these couples, further analysis revealed recombinant viral strains with segments of viral genomes in one subject that may have derived from the enrolled partner. Thus, chronically HIV-1 infected individuals may become superinfected with additional HIV strains from their seroconcordant sexual partners. In some cases, HIV-1 superinfection may become apparent when recombinant viral strains are detected.

Indexed as

Antiretroviral Therapy, Highly ActiveSexual PartnersDemographyHIV-1HIV InfectionsHomosexuality, MaleHumansLeukocytes, MononuclearMaleMucous MembranePhylogenyPolymerase Chain ReactionRecombination, GeneticRisk FactorsSequence AlignmentSequence Analysis, DNA

Identifiers

PMID19479055
PMCPMC2684644

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.