Evidence map›Paper›PMID 19476657›Full record

ArticleBMC developmental biology2009

Tbx1 and Brn4 regulate retinoic acid metabolic genes during cochlear morphogenesis.

Evan M Braunstein, Dennis C Monks, Vimla S Aggarwal, Jelena S Arnold, Bernice E Morrow

Open access · hybridAbstract read
In one paragraph

Article in BMC developmental biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Biology · 2023
    Article
  3. Article
  4. Pharmacological Rescue of the Brain Cortex Phenotype ofFrontiers in molecular neuroscience · 2021
    Article
  5. Article
  6. Sculpting the skull through neurosensory epithelial-mesenchymal signaling.Developmental dynamics : an official publication of the American Association of Anatomists · 2019
    Review
  7. Review
  8. Biology open · 2017
    Article
  9. Otologic and audiologic findings in 22q11.2 deletion syndrome.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2017
    Article
  10. QTL Mapping of Endocochlear Potential Differences between C57BL/6J and BALB/cJ mice.Journal of the Association for Research in Otolaryngology : JARO · 2016
    Article
  11. Review
  12. Article
  13. The role of Zic genes in inner ear development in the mouse: Exploring mutant mouse phenotypes.Developmental dynamics : an official publication of the American Association of Anatomists · 2014
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Molecular mechanisms of inner ear development.Cold Spring Harbor perspectives in biology · 2012
    Review
  20. Identification of putative retinoic acid target genes downstream of mesenchymal Tbx1 during inner ear development.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Evan M BraunsteinDepartment of Genetics, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, USA. ebraunst@aecom.yu.edu
Dennis C Monks
Vimla S Aggarwal
Jelena S Arnold
Bernice E Morrow
Albert Einstein College of Medicine · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Genetic Analysis of Tbx1 in Ear DisordersR01DC005186 · NIDCD · YESHIVA UNIVERSITY · PI MORROW, BERNICE E · 2003 to 2013
$3.6M
Investigating the Role of Tbx1 in Ear DevelopmentF30DC008239 · NIDCD · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI BRAUNSTEIN, EVAN M · 2006 to 2008
$164k
NIDCD NIH HHS DC008239-03NIDCD NIH HHS DC05186-06NIDCD NIH HHS F30 DC008239NIDCD NIH HHS R01 DC005186NIGMS NIH HHS T32 GM007288
6 · The paper itself

Abstract

backgroundIn vertebrates, the inner ear is comprised of the cochlea and vestibular system, which develop from the otic vesicle. This process is regulated via inductive interactions from surrounding tissues. Tbx1, the gene responsible for velo-cardio-facial syndrome/DiGeorge syndrome in humans, is required for ear development in mice. Tbx1 is expressed in the otic epithelium and adjacent periotic mesenchyme (POM), and both of these domains are required for inner ear formation. To study the function of Tbx1 in the POM, we have conditionally inactivated Tbx1 in the mesoderm while keeping expression in the otic vesicle intact.

resultsConditional mutants (TCre-KO) displayed malformed inner ears, including a hypoplastic otic vesicle and a severely shortened cochlear duct, indicating that Tbx1 expression in the POM is necessary for proper inner ear formation. Expression of the mesenchyme marker Brn4 was also lost in the TCre-KO. Brn4-;Tbx1+/-embryos displayed defects in growth of the distal cochlea. To identify a potential signal from the POM to the otic epithelium, expression of retinoic acid (RA) catabolizing genes was examined in both mutants. Cyp26a1 expression was altered in the TCre-KO, while Cyp26c1 showed reduced expression in both TCre-KO and Brn4-;Tbx1+/- embryos.

conclusionThese results indicate that Tbx1 expression in the POM regulates cochlear outgrowth potentially via control of local retinoic acid activity.

Indexed as

Gene Expression RegulationAnimalsCell ProliferationCell SurvivalCochleaEar, InnerEmbryo, MammalianFemaleMaleMesodermMiceMice, KnockoutMorphogenesisNerve Tissue ProteinsPOU Domain FactorsT-Box Domain ProteinsNerve Tissue ProteinsPou3f4 protein, mousePOU Domain FactorsT-Box Domain ProteinsTbx1 protein, mouseTretinoin

Identifiers

PMID19476657
PMCPMC2700094
OpenAlexW2022522458

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.