Evidence map›Paper›PMID 19476638›Full record

ArticleBMC microbiology2009

A pentaplex PCR assay for the rapid detection of methicillin-resistant Staphylococcus aureus and Panton-Valentine Leucocidin.

Hassanain Al-Talib, Chan Yean Yean, Alyaa Al-Khateeb, Habsah Hassan, Kirnpal-Kaur Banga Singh, Karim Al-Jashamy, Manickam Ravichandran

Abstract read
In one paragraph

Article in BMC microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Virulence Profiling of Multidrug-Resistant ClinicalMicrobial drug resistance (Larchmont, N.Y.) · 2026
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  5. A report of coagulase-negativeIranian journal of veterinary research · 2024
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  6. Detection ofFrontiers in immunology · 2024
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  11. Pre-operative Colonization byRevista brasileira de ortopedia · 2022
    Article
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  14. Article
  15. Article
  16. Article
  17. Acquisition Risk Factors of the SCCAntibiotics (Basel, Switzerland) · 2020
    Article
  18. Molecular characterisation of methicillin-resistantEpidemiology and infection · 2020
    Article
  19. Article
  20. Molecular and phylogenetic study ofVeterinary world · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hassanain Al-TalibDepartment of Medical Microbiology and Parasitology, School of Medical Sciences, Universiti Sains Malaysia Kota Bharu, Malaysia. hassanainiy@yahoo.com
Chan Yean Yean
Alyaa Al-Khateeb
Habsah Hassan
Kirnpal-Kaur Banga Singh
Karim Al-Jashamy
Manickam Ravichandran

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundStaphylococcus aureus is a major human pathogen, especially methicillin-resistant S. aureus (MRSA), which causes a wide range of hospital and community-acquired infections worldwide. Conventional testing for detection of MRSA takes 2-5 days to yield complete information of the organism and its antibiotic sensitivity pattern.

resultsThe present study focused on the development of a pentaplex PCR assay for the rapid detection of MRSA. The assay simultaneously detected five genes, namely 16S rRNA of the Staphylococcus genus, femA of S. aureus, mecA that encodes methicillin resistance, lukS that encodes production of Panton-Valentine leukocidin (PVL), a necrotizing cytotoxin, and one internal control. Specific primer pairs were successfully designed and simultaneously amplified the targeted genes. The analytical sensitivity and specificity of the pentaplex PCR assay was evaluated by comparing it with the conventional method. The analytical sensitivity of the pentaplex PCR at the DNA level was found to be 10 ng DNA. The analytical specificity was evaluated with 34 reference staphylococci and non-staphylococcal strains and was found to be 100%. The diagnostic evaluation of MRSA carried out using 230 clinical isolates, showed 97.6% of sensitivity, 99.3% of specificity, 98.8% of positive predictive value and 98.6% of negative predictive value compared to the conventional method. The presence of an internal control in the pentaplex PCR assay is important to exclude false-negative cases.

conclusionThe pentaplex PCR assay developed was rapid and gave results within 4 h, which is essential for the identification of Staphylococcus spp., virulence and their resistance to methicillin. Our PCR assay may be used as an effective surveillance tool to survey the prevalence of MRSA and PVL-producing strains in hospitals and the community.

Indexed as

Bacterial ToxinsCross-Sectional StudiesDNA PrimersExotoxinsGenes, BacterialHumansLeukocidinsMethicillin-Resistant Staphylococcus aureusPolymerase Chain ReactionSensitivity and SpecificityBacterial ToxinsDNA PrimersExotoxinsLeukocidinsPanton-Valentine leukocidin

Identifiers

PMID19476638
PMCPMC2700277

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.