Evidence map›Paper›PMID 19471314›Full record

ArticleEuropean journal of human genetics : EJHG2009

Expression of SNURF-SNRPN upstream transcripts and epigenetic regulatory genes during human spermatogenesis.

Michaela Wawrzik, Andrej-Nikolai Spiess, Ralf Herrmann, Karin Buiting, Bernhard Horsthemke

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Does SpermBiomedicines · 2024
    Review
  10. Article
  11. Review
  12. Deciphering GRINA/Lifeguard1: Nuclear Location, CaInternational journal of molecular sciences · 2019
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Angelman syndrome imprinting center encodes a transcriptional promoter.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Michaela WawrzikInstitut für Humangenetik, Universitätsklinikum Essen, Germany.
Andrej-Nikolai Spiess
Ralf Herrmann
Karin Buiting
Bernhard Horsthemke
Essen University Hospital · DEInstitut für Medizinische Informatik, Biometrie und Epidemiologie · DEUniversity Medical Center Hamburg-Eppendorf · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The imprinted domain in human 15q11-q13 is controlled by a bipartite imprinting centre (IC), which overlaps the 5' part of the paternally expressed SNURF-SNRPN gene. We have recently described two novel genes upstream of SNURF-SNRPN (PWRN1 and PWRN2), which are biallelically expressed in the testis. We have now found that PWRN1 represents an alternative 5' part of SNURF-SNRPN, and that its expression in the brain is imprinted. To determine when the locus is activated during spermatogenesis and which factors are involved in this process, we have mined gene-expression data of testicular biopsies from men with different types of spermatogenic failure. Whereas PWRN1-SNURF-SNRPN and PWRN2 are expressed in post-meiotic germ cells only, a hitherto undetected SNURF-SNRPN upstream transcript is expressed already at meiosis. Several epigenetic factors (eg, MBD1 and MBD2 isoforms, MBD3L1, SUVH39H2, BRDT, and EZH2) are upregulated at specific stages of spermatogenesis, suggesting that they play an important role in the epigenetic reprogramming during spermatogenesis.

Indexed as

Epigenesis, GeneticGenes, RegulatorAlternative SplicingChromosomes, Human, Pair 15DNA-Binding ProteinsGene ExpressionGenomic ImprintingHumansMaleNuclear ProteinsRepressor ProteinsRNA, MessengersnRNP Core ProteinsSpermatogenesisTestisDNA-Binding ProteinsMBD2 protein, humanMBD3L1 protein, humanNuclear ProteinsRepressor ProteinsRNA, MessengersnRNP Core ProteinsSNURF protein, human

Identifiers

PMID19471314
PMCPMC2986690
OpenAlexW2075916208

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.