Evidence map›Paper›PMID 19470157›Full record

ArticleBMC microbiology2009

Distinct roles of long/short fimbriae and gingipains in homotypic biofilm development by Porphyromonas gingivalis.

Masae Kuboniwa, Atsuo Amano, Ei Hashino, Yumiko Yamamoto, Hiroaki Inaba, Nobushiro Hamada, Koji Nakayama, Gena D Tribble, Richard J Lamont, Satoshi Shizukuishi

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 1 synthesis or guideline pooled it, 108 citations in OpenAlex.

  1. Host insulin resistance caused byFrontiers in cellular and infection microbiology · 2023
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. International journal of molecular sciences · 2025
    Article
  9. Review
  10. Article
  11. Synergistic effects ofFrontiers in cellular and infection microbiology · 2025
    Article
  12. Review
  13. Article
  14. Comparative analysis ofMicrobiology spectrum · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Phylogenomic analysis of theFrontiers in microbiology · 2023
    Article
  19. Review
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Masae KuboniwaDepartment of Preventive Dentistry, Osaka University Graduate School of Dentistry, Suita-Osaka, Japan. kuboniwa@dent.osaka-u.ac.jp
Atsuo Amano
Ei Hashino
Yumiko Yamamoto
Hiroaki Inaba
Nobushiro Hamada
Koji Nakayama
Gena D Tribble
Richard J Lamont
Satoshi Shizukuishi
Osaka University · JPFlorida College · USKanagawa Dental University · JPNagasaki University · JPThe University of Texas Health Science Center at Houston · US

Funding

MOLECULAR ASPECTS OF ORAL PLAQUE FORMATIONR01DE012505 · NIDCR · UNIVERSITY OF WASHINGTON · PI Richard J Lamont, JAN S POTEMPA · 1998 to 2026
$9.5M
NIDCR NIH HHS DE12505
6 · The paper itself

Abstract

backgroundPorphyromonas gingivalis, a periodontal pathogen, expresses a number of virulence factors, including long (FimA) and short (Mfa) fimbriae as well as gingipains comprised of arginine-specific (Rgp) and lysine-specific (Kgp) cysteine proteinases. The aim of this study was to examine the roles of these components in homotypic biofilm development by P. gingivalis, as well as in accumulation of exopolysaccharide in biofilms.

resultsBiofilms were formed on saliva-coated glass surfaces in PBS or diluted trypticase soy broth (dTSB). Microscopic observation showed that the wild type strain formed biofilms with a dense basal monolayer and dispersed microcolonies in both PBS and dTSB. A FimA deficient mutant formed patchy and small microcolonies in PBS, but the organisms proliferated and formed a cohesive biofilm with dense exopolysaccharides in dTSB. A Mfa mutant developed tall and large microcolonies in PBS as well as dTSB. A Kgp mutant formed markedly thick biofilms filled with large clumped colonies under both conditions. A RgpA/B double mutant developed channel-like biofilms with fibrillar and tall microcolonies in PBS. When this mutant was studied in dTSB, there was an increase in the number of peaks and the morphology changed to taller and loosely packed biofilms. In addition, deletion of FimA reduced the autoaggregation efficiency, whereas autoaggregation was significantly increased in the Kgp and Mfa mutants, with a clear association with alteration of biofilm structures under the non-proliferation condition. In contrast, this association was not observed in the Rgp-null mutants.

conclusionThese results suggested that the FimA fimbriae promote initial biofilm formation but exert a restraining regulation on biofilm maturation, whereas Mfa and Kgp have suppressive and regulatory roles during biofilm development. Rgp controlled microcolony morphology and biovolume. Collectively, these molecules seem to act coordinately to regulate the development of mature P. gingivalis biofilms.

Indexed as

Adhesins, BacterialBiofilmsCulture MediaCysteine EndopeptidasesFimbriae, BacterialFimbriae ProteinsGingipain Cysteine EndopeptidasesPorphyromonas gingivalisAdhesins, BacterialCulture MediaCysteine EndopeptidasesFimbriae ProteinsfimbrillinGingipain Cysteine Endopeptidases

Identifiers

PMID19470157
PMCPMC2697998
OpenAlexW2009378504

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.