Evidence map›Paper›PMID 19468063›Full record

ArticleThe Journal of experimental medicine2009

CD1c bypasses lysosomes to present a lipopeptide antigen with 12 amino acids.

Ildiko Van Rhijn, David C Young, Annemieke De Jong, Jenny Vazquez, Tan-Yun Cheng, Rahul Talekar, Duarte C Barral, Duarte Barral, Luis León, Michael B Brenner and 8 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Development and function of chicken XCR1Frontiers in immunology · 2023
    Article
  5. Role of MHC class I pathways inFrontiers in cellular and infection microbiology · 2023
    Review
  6. Review
  7. CD1: A Singed Cat of the Three Antigen Presentation Systems.Archivum immunologiae et therapiae experimentalis · 2017
    Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Molecular basis of mycobacterial lipid antigen presentation by CD1c and its recognition by αβ T cells.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. The CD1 size problem: lipid antigens, ligands, and scaffolds.Cellular and molecular life sciences : CMLS · 2014
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
    Barral, Duarte [corrected to Barral, Duarte C]
5 · Who and what money

Authors and funding

18 authors at 7 institutions in 1 country.

Ildiko Van RhijnDivision of Rheumatology, Immunology and Allergy, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA. i.vanrhijn@uu.nl
David C Young
Annemieke De Jong
Jenny Vazquez
Tan-Yun Cheng
Rahul Talekar
Duarte C Barral
Duarte Barral
Luis León
Michael B Brenner
Joel T Katz
Richard Riese
Ruth M Ruprecht
Peter B O'Connor
Catherine E Costello
Steven A Porcelli
Volker Briken
D Branch Moody
Brigham and Women's Hospital · USBoston University · USCenter for Rheumatology · USHarvard University · USAlbert Einstein College of Medicine · USENT and Allergy · USUniversity of Maryland, College Park · US

Funding

The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Daniel Lingwood · 2004 to 2026
$94.4M
XI INTERNATIONAL SYMPOSIUM ON AMYLOIDOSISP41RR010888 · NCRR · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZAIA, JOSEPH · 1996 to 2011
$18.6M
T cell response to CDI-restricted lipids in tuberculosisR01AI049313 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI MOODY, DAVID BRANCH · 2001 to 2025
$10.6M
CD1 Presentation of Self Lipids to Human T CellsR01AR048632 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI MOODY, DAVID BRANCH · 2002 to 2024
$9.4M
Precision Targeting of CD1-Restricted iNKT Cells for Cancer ImmunotherapyR01AI045889 · NIAID · YESHIVA UNIVERSITY · PI Steven A Porcelli · 1999 to 2026
$9.3M
NCRR NIH HHS P41 RR010888NCRR NIH HHS P41 RR10888NIAID NIH HHS AI45889NIAID NIH HHS P30 AI060354NIAID NIH HHS R01 AI045889NIAID NIH HHS R01 AI049313NIAMS NIH HHS R01 AR048632
6 · The paper itself

Abstract

The recent discovery of dideoxymycobactin (DDM) as a ligand for CD1a demonstrates how a nonribosomal lipopeptide antigen is presented to T cells. DDM contains an unusual acylation motif and a peptide sequence present only in mycobacteria, but its discovery raises the possibility that ribosomally produced viral or mammalian proteins that commonly undergo lipidation might also function as antigens. To test this, we measured T cell responses to synthetic acylpeptides that mimic lipoproteins produced by cells and viruses. CD1c presented an N-acyl glycine dodecamer peptide (lipo-12) to human T cells, and the response was specific for the acyl linkage as well as the peptide length and sequence. Thus, CD1c represents the second member of the CD1 family to present lipopeptides. lipo-12 was efficiently recognized when presented by intact cells, and unlike DDM, it was inactivated by proteases and augmented by protease inhibitors. Although lysosomes often promote antigen presentation by CD1, rerouting CD1c to lysosomes by mutating CD1 tail sequences caused reduction in lipo-12 presentation. Thus, although certain antigens require antigen processing in lysosomes, others are destroyed there, providing a hypothesis for the evolutionary conservation of large CD1 families containing isoforms that survey early endosomal pathways.

Indexed as

AntigensAntigens, CD1GlycoproteinsAmino AcidsAmino Acid SequenceAnimalsCell LineHumansLipopeptidesLysosomesMolecular Sequence DataMolecular StructureOxazolesRecombinant ProteinsT-LymphocytesAmino AcidsAntigensAntigens, CD1CD1C protein, humandideoxymycobactinGlycoproteinsLipopeptidesOxazolesRecombinant Proteins

Identifiers

PMID19468063
PMCPMC2715062
OpenAlexW2112453089

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.