Evidence map›Paper›PMID 19463719›Full record

ArticleVirus research2009

Molecular characterization of a new PToV strain. Evolutionary implications.

J Pignatelli, M Jimenez, J Luque, M T Rejas, A Lavazza, D Rodriguez

Open access · greenAbstract read
In one paragraph

Article in Virus research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

J PignatelliDepartment of Molecular and Cellular Biology, Centro Nacional de Biotecnologia, CSIC, C/Darwin 3, 28049 Madrid, Spain.
M Jimenez
J Luque
M T Rejas
A Lavazza
D Rodriguez
Centro Nacional de Biotecnología · ESCentro de Biología Molecular Severo Ochoa · ESIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toroviruses are emergent viruses, belonging to the Nidovirales order, that remain mostly ignored, despite they are able to infect different species of domestic animals and humans, causing enteric diseases and diarrhea. Thus far, only five variants of porcine torovirus (PToV) have been identified. In this report we describe the identification and partial characterization of a new strain of porcine torovirus (PToV-BRES) that was detected by RT-PCR in a swine faecal specimen from a farm in Brescia (Italy). The complete genes coding for the nucleocapsid (N), hemagglutinin-esterase (HE) and membrane (M) proteins were amplified, and sequence analysis showed that PToV-BRES is a new PToV strain that, based on the HE gene sequence, is phylogenetically related to P4 strain, that was up to now the only member of a distinct PToV lineage. The nucleocapsid protein from PToV-BRES was expressed in insect cells as a his-tagged protein, purified by affinity chromatography and used to develop an ELISA method to detect antibodies against PToV. This assay was evaluated using a serum collection including 45 samples from three commercial farms from Spain. High antibody prevalence against PToV was observed in the three farms, both in adult animals and in piglets, which could suggest that PToV might be endemic in Spanish porcine population. The ELISA method developed in this work could be useful in future epidemiological surveys about toroviruses.

Indexed as

Evolution, MolecularAnimalsAntibodies, ViralCattleEnzyme-Linked Immunosorbent AssayHemagglutinins, ViralItalyMicroscopy, ElectronNucleocapsid ProteinsPhylogenyRNA, ViralSequence Analysis, DNASeroepidemiologic StudiesSpainSwineSwine DiseasesAntibodies, ViralHemagglutinins, ViralNucleocapsid ProteinsRNA, ViralViral Matrix Proteins

Identifiers

PMID19463719
PMCPMC7114482
OpenAlexW2041802335

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.