Evidence map›Paper›PMID 19460346›Full record

ArticleDevelopmental cell2009

The polycomb complex protein mes-2/E(z) promotes the transition from developmental plasticity to differentiation in C. elegans embryos.

T Yuzyuk, T H I Fakhouri, J Kiefer, S E Mango

Abstract read
In one paragraph

Article in Developmental cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed.

  1. Article
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  3. Review
  4. Article
  5. Article
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  15. Article
  16. Induced Neurons From Germ Cells inFrontiers in neuroscience · 2021
    Review
  17. Conversion of Germ Cells to Somatic Cell Types inJournal of developmental biology · 2020
    Review
  18. Article
  19. Review
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

T YuzyukHuntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
T H I Fakhouri
J Kiefer
S E Mango

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
ORGANOGENESIS OF THE PHARYNX IN C ELEGANSR01GM056264 · NIGMS · UNIVERSITY OF UTAH · PI MANGO, SUSAN E · 1998 to 2010
$3.3M
Regulation of the pharyngeal cell fate specificationF32GM077903 · NIGMS · UNIVERSITY OF UTAH · PI YUZYUK, TATIANA · 2006 to 2008
$135k
The role of the FOXA protein PHA-4 in gonad developmentF32GM065728 · NIGMS · UNIVERSITY OF UTAH · PI KIEFER, JULIE C · 2002 to 2004
$112k
NCI NIH HHS P30 CA042014NCI NIH HHS P30CA042014NIGMS NIH HHS F32 GM065728NIGMS NIH HHS F32 GM077903NIGMS NIH HHS F32GM077903NIGMS NIH HHS F32GM65728NIGMS NIH HHS R01 GM056264
6 · The paper itself

Abstract

We have used expression profiling and in vivo imaging to characterize Caenorhabditis elegans embryos as they transit from a developmentally plastic state to the onset of differentiation. Normally, this transition is accompanied by activation of developmental regulators and differentiation genes, downregulation of early-expressed genes, and large-scale reorganization of chromatin. We find that loss of plasticity and differentiation onset depends on the Polycomb complex protein mes-2/E(Z). mes-2 mutants display prolonged developmental plasticity in response to heterologous developmental regulators. Early-expressed genes remain active, differentiation genes fail to reach wild-type levels, and chromatin retains a decompacted morphology in mes-2 mutants. By contrast, loss of the developmental regulators pha-4/FoxA or end-1/GATA does not prolong plasticity. This study establishes a model by which to analyze developmental plasticity within an intact embryo. mes-2 orchestrates large-scale changes in chromatin organization and gene expression to promote the timely loss of developmental plasticity. Our findings indicate that loss of plasticity can be uncoupled from cell fate specification.

Indexed as

Cell DifferentiationAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEmbryo, NonmammalianGene Expression ProfilingMutationPolycomb-Group ProteinsRepressor ProteinsCaenorhabditis elegans Proteinsmes-2 protein, C elegansPolycomb-Group ProteinsRepressor Proteins

Identifiers

PMID19460346
PMCPMC2693235

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.