Evidence map›Paper›PMID 19458924›Full record

ArticleBiotechnology letters2009

Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli.

L P Yomano, S W York, K T Shanmugam, L O Ingram

Open access · hybridAbstract read
In one paragraph

Article in Biotechnology letters, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 122 citations in OpenAlex.

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  8. The Physiological Responses ofMicroorganisms · 2020
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  14. Experimental evolution reveals an effective avenue to release catabolite repression via mutations in XylR.Proceedings of the National Academy of Sciences of the United States of America · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

L P YomanoDepartment of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611, USA.
S W York
K T Shanmugam
L O Ingram
University of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The use of lignocellulose as a source of sugars for bioproducts requires the development of biocatalysts that maximize product yields by fermenting mixtures of hexose and pentose sugars to completion. In this study, we implicate mgsA encoding methylglyoxal synthase (and methylglyoxal) in the modulation of sugar metabolism. Deletion of this gene (strain LY168) resulted in the co-metabolism of glucose and xylose, and accelerated the metabolism of a 5-sugar mixture (mannose, glucose, arabinose, xylose and galactose) to ethanol.

Indexed as

Carbohydrate MetabolismGene DeletionCarbon-Oxygen LyasesDNA, BacterialEscherichia coliEscherichia coli ProteinsEthanolLigninMolecular Sequence DataSequence Analysis, DNACarbon-Oxygen LyasesDNA, BacterialEscherichia coli ProteinsEthanolLigninlignocellulosemethylglyoxal synthase

Identifiers

PMID19458924
PMCPMC2721133
OpenAlexW2095407700

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.