Evidence map›Paper›PMID 19458175›Full record

ArticleJournal of clinical microbiology2009

Partial atlE sequencing of Staphylococcus epidermidis strains from prosthetic joint infections.

V Sivadon, M Rottman, J-C Quincampoix, E Prunier, M Le Moal, P de Mazancourt, P Hoffmeyer, A Lortat-Jacob, P Piriou, T Judet and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Staphylococcal cassette chromosome mec (SCCmec) and arginine catabolic mobile element (ACME) in Staphylococcus epidermidis isolated from prosthetic joint infections.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

V SivadonAP-HP, Laboratoire de Microbiologie, Hôpital Ambroise Paré, Boulogne-Billancourt, France. valerie.sivadon-tardy@apr.aphp.fr
M Rottman
J-C Quincampoix
E Prunier
M Le Moal
P de Mazancourt
P Hoffmeyer
A Lortat-Jacob
P Piriou
T Judet
L Bernard
J-L Gaillard
Hôpital Raymond-Poincaré · FRAssistance Publique – Hôpitaux de Paris · FRUniversité de Versailles Saint-Quentin-en-Yvelines · FRHôpital Ambroise-Paré · FRUniversity Hospital of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Partial atlE sequencing (atlE nucleotides 2782 to 3114 [atlE(2782-3114)]) was performed in 41 Staphylococcus epidermidis isolates from prosthetic joint infections (PJIs) and 44 isolates from skin as controls. The atlE(2782-3114) allele 1 (type strain sequence) was significantly more frequent in PJI strains (38/41 versus 29/44 in controls; P = 0.0023). Most PJI strains were positive for mecA, icaA/icaD, and IS256, and most belonged to the sequence type 27 subgroup, suggesting the involvement of few related clones.

Indexed as

AllelesBacterial ProteinsBacterial Typing TechniquesCluster AnalysisDNA, BacterialGenotypeHumansJoint DiseasesMolecular Sequence DataProsthesis-Related InfectionsSequence Analysis, DNAStaphylococcal InfectionsStaphylococcus epidermidisVirulence FactorsBacterial ProteinsDNA, BacterialVirulence Factors

Identifiers

PMID19458175
PMCPMC2708500
OpenAlexW2158126216

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.