Evidence map›Paper›PMID 19455420›Full record

ArticleGlycoconjugate journal2009

Assay and heterologous expression in Pichia pastoris of plant cell wall type-II membrane anchored glycosyltransferases.

Bent Larsen Petersen, Jack Egelund, Iben Damager, Kirsten Faber, Jacob Krüger Jensen, Zhang Yang, Eric Paul Bennett, Henrik Vibe Scheller, Peter Ulvskov

Open access · hybridAbstract read
In one paragraph

Article in Glycoconjugate journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  14. Engineering mammalian mucin-type O-glycosylation in plants.The Journal of biological chemistry · 2012
    Article
  15. Article
  16. Article
  17. Biosynthesis of pectin.Plant physiology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Bent Larsen PetersenCell Wall Biology and Molecular Plant Virology, Institute of Genetics and Biotechnology, Faculty of Agricultural Sciences, University of Aarhus and Centre for Pro-Active Plants (VKR), Thorvaldsensvej 40, Frederiksberg, 1871, Denmark. b.petersen@dias.kvl.dk
Jack Egelund
Iben Damager
Kirsten Faber
Jacob Krüger Jensen
Zhang Yang
Eric Paul Bennett
Henrik Vibe Scheller
Peter Ulvskov
Aarhus University · DKUniversity of Copenhagen · DKLawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two Arabidopsis xylosyltransferases, designated RGXT1 and RGXT2, were recently expressed in Baculovirus transfected insect cells and by use of the free sugar assay shown to catalyse transfer of D-xylose from UDP-alpha-D-xylose to L-fucose and derivatives hereof. We have now examined expression of RGXT1 and RGXT2 in Pichia pastoris and compared the two expression systems. Pichia transformants, expressing soluble, secreted forms of RGXT1 and RGXT2 with an N- or C-terminal Flag-tag, accumulated recombinant, hyper-glycosylated proteins at levels between 6 and 16 mg protein * L(-1) in the media fractions. When incubated with 0.5 M L-fucose and UDP-D-xylose all four RGXT1 and RGXT2 variants catalyzed transfer of D-xylose onto L-fucose with estimated turnover numbers between 0.15 and 0.3 sec(-1), thus demonstrating that a free C-terminus is not required for activity. N- and O-glycanase treatment resulted in deglycosylation of all four proteins, and this caused a loss of xylosyltransferase activity for the C-terminally but not the N-terminally Flag-tagged proteins. The RGXT1 and RGXT2 proteins displayed an absolute requirement for Mn(2+) and were active over a broad pH range. Simple dialysis of media fractions or purification on phenyl Sepharose columns increased enzyme activities 2-8 fold enabling direct verification of the product formed in crude assay mixtures using electrospray ionization mass spectrometry. Pichia expressed and dialysed RGXT variants yielded activities within the range 0.011 to 0.013 U (1 U = 1 nmol conversion of substrate * min(-1) * microl medium(-1)) similar to those of RGXT1 and RGXT2 expressed in Baculovirus transfected insect Sf9 cells. In summary, the data presented suggest that Pichia is an attractive host candidate for expression of plant glycosyltransferases.

Indexed as

Amino Acid SequenceAnimalsArabidopsisArabidopsis ProteinsBase SequenceCations, DivalentCell MembraneCell WallEnzyme ActivationEnzyme AssaysGlycoproteinsGlycosylationGlycosyltransferasesHydrogen-Ion ConcentrationImmunoblottingInsectaArabidopsis ProteinsCations, DivalentGlycoproteinsGlycosyltransferases

Identifiers

PMID19455420
PMCPMC2793385
OpenAlexW2038636964

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.