Evidence map›Paper›PMID 19452453›Full record

ArticleProteomics2009

Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana.

Ing-Feng Chang, Amy Curran, Rebekah Woolsey, David Quilici, John C Cushman, Ron Mittler, Alice Harmon, Jeffrey F Harper

Abstract read
In one paragraph

Article in Proteomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Evolution of aromatic amino acid metabolism in plants: a key driving force behind plant chemical diversity in aromatic natural products.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  5. Article
  6. Plants (Basel, Switzerland) · 2024
    Article
  7. Article
  8. Article
  9. The apple 14-3-3 geneFrontiers in plant science · 2023
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Comprehensive Analysis for GRF Transcription Factors in Sacred Lotus (International journal of molecular sciences · 2022
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Reciprocal antagonistic regulation of E3 ligases controls ACC synthase stability and responses to stress.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ing-Feng ChangDepartment of Biochemistry and Molecular Biology, University of Nevada, Reno, NV, USA.
Amy Curran
Rebekah Woolsey
David Quilici
John C Cushman
Ron Mittler
Alice Harmon
Jeffrey F Harper

Funding

UNDERGRADUATE RESEARCH AND TRAININGP20RR016464 · NCRR · UNIVERSITY OF NEVADA RENO · PI SCHLAUCH, KAREN · 2001 to 2011
$30.3M
Ca2+-Pumps in Plants: Pollen Growth and FertilizationR01GM070813 · NIGMS · UNIVERSITY OF NEVADA RENO · PI HARPER, JEFFREY F · 2004 to 2008
$951k
NCRR NIH HHS P20 RR-016464NCRR NIH HHS P20 RR016464NIGMS NIH HHS 1R01 GM070813NIGMS NIH HHS R01 GM070813
6 · The paper itself

Abstract

In eukaryotes, 14-3-3 dimers regulate hundreds of functionally diverse proteins (clients), typically in phosphorylation-dependent interactions. To uncover new clients, 14-3-3 omega (At1g78300) from Arabidopsis was engineered with a "tandem affinity purification" tag and expressed in transgenic plants. Purified complexes were analyzed by tandem MS. Results indicate that 14-3-3 omega can dimerize with at least 10 of the 12 14-3-3 isoforms expressed in Arabidopsis. The identification here of 121 putative clients provides support for in vivo 14-3-3 interactions with a diverse array of proteins, including those involved in: (i) Ion transport, such as a K(+) channel (GORK), a Cl(-) channel (CLCg), Ca(2+) channels belonging to the glutamate receptor family (1.2, 2.1, 2.9, 3.4, 3.7); (ii) hormone signaling, such as ACC synthase (isoforms ACS-6, -7 and -8 involved in ethylene synthesis) and the brassinolide receptors BRI1 and BAK1; (iii) transcription, such as 7 WRKY family transcription factors; (iv) metabolism, such as phosphoenol pyruvate carboxylase; and (v) lipid signaling, such as phospholipase D (beta and gamma). More than 80% (101) of these putative clients represent previously unidentified 14-3-3 interactors. These results raise the number of putative 14-3-3 clients identified in plants to over 300.

Indexed as

14-3-3 ProteinsAmino Acid MotifsArabidopsisArabidopsis ProteinsConsensus SequenceElectrophoresis, Gel, Two-DimensionalEscherichia coliGreen Fluorescent ProteinsPlant ProteinsPlants, Genetically ModifiedProtein BindingProtein Interaction MappingProtein IsoformsProteomicsRecombinant Fusion ProteinsSignal Transduction14-3-3omega protein, Arabidopsis14-3-3 ProteinsArabidopsis ProteinsGreen Fluorescent ProteinsPlant ProteinsProtein IsoformsRecombinant Fusion Proteins

Identifiers

PMID19452453
PMCPMC4077669

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.